RetrogeneDB ID:
retro_mputfur_230
Organism:
Location:
GL896899.1:15907496-15908255 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
93.68 %
Coverage:
56.1 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
RGS7
Parental gene aliases:
No gene alias available
Parental gene description:
regulator of G-protein signaling 7 [Source:HGNC Symbol;Acc:10003]

Genomic region (view in browser)





>retro_mputfur_230
GGATGTGTAAATACCACTGAAGTGGACATCAAGAAGTCATCCAGAATGAGAAACCCACAC
AAAACACACAAGTCTGTCTATGGTTTACAAAATGACATCAGAAGTCACAGCCCTACCCAC
ACCCCCACACCAGAAACTAAACCTCCAACAGAAGATGAGCTACAGCAACAGATTAAATAC
TGGCAAATACAGTTAGATAGACATCGGTTAAAAATGTCAAAAGTTGATGATAGTCTGTTA
AGTTACACGGAACAATACTTAGAATATGACCCATTTCTTGTGCCACCTGACACTTCGAAC
CCATGGCTATCTGATGATACTACTTTCTGGGAACTCGAAGCAAGCAAAGAACCAAGCCAG
CAGGGGGTAAAGCGATGGGGTTTTGGCATGGATGAAGCATTGAAAGACCCCATTGGGAGA
GAACAGTTCCTTAAATTTCTAGAGTCGGAATTCAGTTCAGAAAATTTAAGATTCTGGCTA
GCCATGGAGGACCTGAAGAAAAGGCCTATTCGAGAAGTCCCTTCCCGAGTGTAGGAAATA
TGGCAAGAATTTCTGGCTCCCAGAGCCCCCAGCACCATTAACTTGGATTCTAAGAGCTAT
GACAAAACCACACAGAATGTGAAGGAGCCCGGGTGGTACACGTTCGAGGACTCTCAGGAG
CACATTTACAAACTGATGAAAAGTGATTCATATCCACGTTTTATAAGATCCAGTGCCTAC
CAAGAGTTTCTACAGGCAAAGAAAAAGGGGAAATCTCTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GCVNTTEVDIKKSSRMRNPHKTRKSVYGLQNDIRSHSPTHTPTPETKPPTEDELQQQIKYWQIQLDRHRLKMSKVADSLLTYTEQYLEYDPFLVPPDPSN
GCVNTTEVDIKKSSRMRNPHKT.KSVYGLQNDIRSHSPTHTPTPETKPPTEDELQQQIKYWQIQLDRHRLKMSKV.DSLL.YTEQYLEYDPFLVPPD.SN
Retrocopy
GCVNTTEVDIKKSSRMRNPHKTHKSVYGLQNDIRSHSPTHTPTPETKPPTEDELQQQIKYWQIQLDRHRLKMSKVDDSLLSYTEQYLEYDPFLVPPDTSN


Parental protein
PWLSDDTTFWELEASKEPSQQRVKRWGFGMDEALKDPVGREQFLKFLESEFSSENLRFWLAVEDLKKRPIREVPSRVQEIWQEFLAPGAPSAINLDSKSY
PWLSDDTTFWELEASKEPSQQ.VKRWGFGMDEALKDP.GREQFLKFLESEFSSENLRFWLA.EDLKKRPIREVPSRV.EIWQEFLAP.APS.INLDSKSY
Retrocopy
PWLSDDTTFWELEASKEPSQQGVKRWGFGMDEALKDPIGREQFLKFLESEFSSENLRFWLAMEDLKKRPIREVPSRV*EIWQEFLAPRAPSTINLDSKSY


Parental protein
DKTTQNVKEPGRYTFEDAQEHIYKLMKSDSYPRFIRSSAYQELLQAKKKGRNI
DKTTQNVKEPG.YTFED.QEHIYKLMKSDSYPRFIRSSAYQE.LQAKKKG...
Retrocopy
DKTTQNVKEPGWYTFEDSQEHIYKLMKSDSYPRFIRSSAYQEFLQAKKKGKSL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide