RetrogeneDB ID:
retro_mputfur_235
Organism:
Location:
GL896899.1:31736418-31736739 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
87.61 %
Coverage:
77.93 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
PPP1R14B
Parental gene aliases:
No gene alias available
Parental gene description:
protein phosphatase 1, regulatory (inhibitor) subunit 14B [Source:HGNC Symbol;Acc:9057]

Genomic region (view in browser)





>retro_mputfur_235
GGGAAAGCATAGAATCCCCCAGGGGATTCTATTCCCCCAGTGAGGCGCCAAGGGAAGTAC
GTCCGCAAGGAGCTACGGAAGCGCCTCAACCTGGAGGAGTGGATCCTGGAGCAGCTCACT
CGCCTCTACGACTGCCAGGAGGAGGAGATCCCAGAGTTGGAGATTGATGTGGACGAACTC
CTAGACATGGAGAGTGATGATACCCGGGCTGCCAGGGTCAAGGAGCTGCTGGTTGACTGT
TACAAACCCACTGAGGCCTTCATCTCTGGCCTGCTGGACAAGATCCGGGGCATGCAGAAG
CTGAGCACACCCCAGAAGAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GAAGEGPGGADDEGPVRRQGKVTVKYDRKELRKRLNLEEWILEQLTRLYDCQEEEIPELEIDVDELLDMESDDTRAARVKELLVDCYKPTEAFISGLLDK
G.A...PG..D...PVRRQG....KY.RKELRKRLNLEEWILEQLTRLYDCQEEEIPELEIDVDELLDMESDDTRAARVKELLVDCYKPTEAFISGLLDK
Retrocopy
GKA*NPPG--DSIPPVRRQG----KYVRKELRKRLNLEEWILEQLTRLYDCQEEEIPELEIDVDELLDMESDDTRAARVKELLVDCYKPTEAFISGLLDK


Parental protein
IRGMQKLSTPQKK
IRGMQKLSTPQKK
Retrocopy
IRGMQKLSTPQKK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide