RetrogeneDB ID:
retro_mputfur_241
Organism:
Location:
GL896899.1:15957395-15957865 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
78.26 %
Coverage:
53.58 %
Frameshifts:
4
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_241
GCTTGGGCTGTAGTTCCTTCAAGATGCCAGCATGTATTAGGAAACACCTCACAAAGGGGC
AAAAGTGGCTTCAATTCTAAGAGTGGACAGCGAGGATCTTCTTCCAAGTCTGGAATGTTG
AAAGACGATGACCTTCAGACCATTAAGAAGGATGTGACCAGATAAAACAAAAAGTGGATT
CTCTATTGGGAAGCCTGGAAAATTCTGGAGAAAGAACAGAGCAAACAAGGAGAGGTGAAG
AATGCTAAGTCAGAAGAGGAGCAGAGCAGCAGCTCCCTGAAGAAAGAGGAGACCGAAGTG
AAGATGGAGTCTGGGGGCGGGTACAGATGACTCTGCTGAGGAGGGGGACCTGCTGGATGG
TGATGATGATGAAGATTGGGGGGAGGGCCAGCTGGGGTTGATCAAGGACGATGAAAAAGG
CTGAGGAGGGAGAGGATGACAGAGACAACACCAATGGCGAGGATGACTCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELT-QIKQKVDSLLESLEK-IEKEQTKQGEMKNDKSEEEQSSSSLKKDET
A.AVVPS..Q.V.GNTS.RGKSGFNSKSGQRGSSSKSG.LK.DDLQTIKK..T.QIKQKVDSLL.SLE...EKEQ.KQGE.KN.KSEEEQSSSSLKK.ET
Retrocopy
AWAVVPSRCQHVLGNTSQRGKSGFNSKSGQRGSSSKSGMLKDDDLQTIKKDVT/QIKQKVDSLLGSLEN\LEKEQSKQGEVKNAKSEEEQSSSSLKKEET


Parental protein
NVKMESEGG-ADDSAEEGDLLDDDDNEDRGDDQLELIKDDE-KEAEEGEDDRDSANGEDDS
.VKMES.GG..DDSAEEGDLLD.DD.ED.G..QL.LIK.D..K.AEEGEDDRD..NGEDDS
Retrocopy
EVKMESGGG\TDDSAEEGDLLDGDDDEDWGEGQLGLIK-DD\KKAEEGEDDRDNTNGEDDS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide