RetrogeneDB ID:
retro_mputfur_244
Organism:
Location:
GL896899.1:27469086-27470041 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
76.54 %
Coverage:
95.8 %
Frameshifts:
5
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_244
ATGGTGAAAGTCAGAGTAAAAGGATTTGACTGTACTGGGTGCCTGGTCATCAGGGGTGCT
TTTAACTCTGGAAAGTGGATATTGTCGCCATCAACAACCCTTTCATTGACCTCAACTACA
TGGTCTATATGTTCCAGTATGTTTCCACCCAGGGAAAATTCCAAGGCATAGTCAGAGCTG
AGAATGGGAAACCTGTCATTAGTGGGAAGCCCGTATCCATCTTCCAGGAGCAAGATCCTG
CCAACATCAAATGGGGTGATACTTGTGCTGAGTATGTTGTGGAGTCCACTGGGGTCTTCA
CCCATCATGGAGAAGGCTGGGGCTCATTTGAATGGTGGGACCAAGAGGGTCATCATCTTT
GCCTCTTCTGATGATGCCCACATGTTTGTGTTGGGCATGAGCCATAAGAAGTTAAGACAA
CTCCCTCAAGATTGTCAGCAATGCCTCCTGCACCACCAACTGCTTGGTCCTTCTGGCCAA
GGTCATCCATGACAACTTCAGTACTGTGGAGGAACTTGAGACCACAATCCACGCCATCAC
TGCCACCTAGAAGACCAGGGGCAGTCCCTCTGGAAAGTTGTGGTGTGATGCCAAGGGGCT
GTGCAGAACATCATCCCTGCTTCTACTGGTGCTGCCAAGGCTGTAAGCAAGGTCATTCCT
GAGCTGAATGGGAAACTCAATGGCATGGCCTTCTGTGTCCCCACACCCAATGTGTCCATC
GTGAAACTGACCTGCTACCTAGAGAAAGCTGCCAAATATGACATCAAGAAGGTGGTGAGG
CAGGTATTGGAGGGCTCCATCAAAGGCATTCTGGACTACACAAAAGAGCAGGTTGTCTCC
CGCAACTCTAACAAATGACACCCCCTCTTCCACTTTTAATGCTGGGGCTGGCATTTCTCT
CATTGACCACTTTGTCAAGCTCATTTCCTGGTATGACAATGAATTTGGCTACAGC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MVKVGVNGFGRIGRLVTRAAFNSGK-VDIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAENGKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGV
MVKV.V.GF...G.LV.R.AFNSGK.VDIVAIN.PFIDLNYMVYMFQY.ST.GKF.G.V.AENGK.VI.GK..SIFQE.DPANIKWGD..AEYVVESTGV
Retrocopy
MVKVRVKGFDCTGCLVIRGAFNSGK/VDIVAINNPFIDLNYMVYMFQYVSTQGKFQGIVRAENGKPVISGKPVSIFQEQDPANIKWGDTCAEYVVESTGV


Parental protein
FT-TMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY-DNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDG
FT..MEKAGAHL.GG.KRVII.A.S.DA.MFV.G..H.K..DNSLKIVSNASCTTNCL..LAKVIHDNF..VE.L.TT.HAITAT.KT...PSGKLW.D.
Retrocopy
FT\IMEKAGAHLNGGTKRVIIFASSDDAHMFVLGMSHKKL\DNSLKIVSNASCTTNCLVLLAKVIHDNFSTVEELETTIHAITAT*KTRGSPSGKLWCDA


Parental protein
R-GAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFN-SDTHSSTFDA
..GA.QNIIPASTGAAKAV.KVIPELNGKL.GMAF.VPTPNVS.V.LTC.LEKAAKY.DIKKVV.Q..EG..KGIL.YT..QVVS...N..DT.SSTF.A
Retrocopy
K/GAVQNIIPASTGAAKAVSKVIPELNGKLNGMAFCVPTPNVSIVKLTCYLEKAAKY-DIKKVVRQVLEGSIKGILDYTKEQVVSRNSN\NDTPSSTFNA


Parental protein
GAGIALNDHFVKLISWYDNEFGYS
GAGI.L.DHFVKLISWYDNEFGYS
Retrocopy
GAGISLIDHFVKLISWYDNEFGYS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide