RetrogeneDB ID:
retro_mputfur_248
Organism:
Location:
GL896899.1:33130589-33130901 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
88.68 %
Coverage:
65.0 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL21
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]

Genomic region (view in browser)





>retro_mputfur_248
ATGACCAACACAAAGGGAAAGAGTAGAGGTACCTGTTATATATTCTCAAGGCCTTTTAGA
AAACATGGAGTTGTTCCTTTGGCCATATACATGCGAATCTACAAGAAAGGTGATATTGGG
GACATCAAAGGATGGGTACTGTTCAAAAGGGAATGCCCCACAAATGTTACCATGGCAAAA
CTGGAAGAGTCTACAGTCTTACTCAGCATGCTGCTGGCATTGTTGTAAACAAACAAATTA
AGGGGAAAGATTCTTGCCAAGAGAATTAATGTGCACATTGAGCATATTAAACATTCAAAG
AGCCGAGATAGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKG-MGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVK-GKILAKRINVRIEHIKH
MTNTKGK.RGT.Y.FSRPFRKHGVVPLA.YMRIYKKGDI.DIKG.MGTVQKGMPHKCYHGKTGRVY..TQHA.GIVVNKQ.K.GKILAKRINV.IEHIKH
Retrocopy
MTNTKGKSRGTCYIFSRPFRKHGVVPLAIYMRIYKKGDIGDIKG/MGTVQKGMPHKCYHGKTGRVYSLTQHAAGIVVNKQIK\GKILAKRINVHIEHIKH


Parental protein
SKSRDS
SKSRDS
Retrocopy
SKSRDS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide