RetrogeneDB ID:
retro_mputfur_249
Organism:
Location:
GL896899.1:34658352-34658705 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
73.11 %
Coverage:
99.15 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_249
TTTAAAGGCACTGGGAAGACACCCTGGAACCAGAGATGGCGATTCACCAATTTAGAAATA
CTCTACTCAGCTGCAACCTAAAATCTTAGGAAACAGTGTATACTAACCTGATCACAGGCG
CAAAGGAAAAGAATCTCAAAGTGAAAGGACTAGTTCTGATACCTACCAAGATTCTGAGAA
TCACTACTACAAGAAAAATTGCTTGTGGTTAAGGTTCTAAGACTTGGGATTGTTCTCAGA
TGAAGATCCACAAGCAACTCATTGATCTGCACAGTCCTTCTGAGATTGTTAAGCAAATTA
CTTCCATCAGTATGGAGGCAGGAGTCAAGGCTGAAGTCACCATTGCAGATGCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
FKDTGKTP-VEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITT-RKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQ
FK.TGKTP..EPE.AIH..R.TL.S.N.KS.E.V...LI.GAKEKNLKVKG.V..PTK.LRITT.RK..CG.GSKTWD..QM.IHK.LIDLHSPSEIVKQ
Retrocopy
FKGTGKTP/LEPEMAIHQFRNTLLSCNLKS*ETVYTNLITGAKEKNLKVKGLVLIPTKILRITTTRKIACG*GSKTWDCSQMKIHKQLIDLHSPSEIVKQ


Parental protein
ITSISIEPGVEVEVTIADA
ITSIS.E.GV..EVTIADA
Retrocopy
ITSISMEAGVKAEVTIADA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide