RetrogeneDB ID:
retro_mputfur_25
Organism:
Location:
GL896899.1:29957217-29958762 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.83 %
Coverage:
58.72 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_25
ATGAAGCAGATCTCATCCTTCATGTCAGAGATCTCAGATGAGTTTAAGGTGGTGGTGGTC
CAGGCCATCAGTGCCCTGTGTCAGAAGTATCCTCGCAAACACGCTGTGCTCATGAACTTC
CTGTTCACCATGCTACGGGAAGAGGGTGGCTTTGAGTACAAGCGGGCCATCGTGGACTGC
ATCATCAGCATCATTGAGGAGAACACGGAGAGCAAGGAGACCGGGCTGTCACACCTGTGC
GAATTCATTGAGGACTGCGAGTTCACCGTGCTGGCCACCCCCATCCTGCATCTTCTAGGC
CAGGAGGGGCCCAAGACCAACAACCCCTCCAAGTACATCCGCTTCATTTATAATCGCGTG
GTCTTGGAGCATGAGGAGGTCCGGGCAGGTGCTGTGAGTGCTCTGGCCAAGTTTGGAGCC
CAGAATGAAGAGATGTTACCCAGTATCTTGGTGTTGCTGAAGAGGTGTGTGATGGACGAT
GACAATGAAGTAAGGGACCGAGCCACCTTCTATCTCAATGTCCTGGAGCAGAAGCAGAAG
GCCCTCAATGCGGGCTATATCCTAAATGGTCTGACTGTTTCCATCCCTGGTCTGGAGAGA
GCCCTGCAGCAGTACACTCTAGAACCATCAGAAAAACCTTTTGACCTCAAGTCTGTGCCC
CTAGCGACCACACCAATGGCAGAACAGAGAACAGAAAGTACCCCCATCACAGCCACCAAT
CAGCCCGAGAAAGTGGCAGCCACCCGGCAAGAGATCTTCCAGGAGCAGTTGGCAGCAGTG
CCAGAGTTCCAAGGGCTGGGGCCCCTCTTCAAGTCCTCTCCTGAGCCTGTGGCCCTCACT
GAATCAGAGACTGAGTATGTCATCCGCTGCACCAAACACACCTTCACTGACCACATGGTG
TTCCAGTTTGACTGCACAAACACACTCAACGACCAGACTTTGGAGAACGTCACAGTGCAG
ATGGAGCCCACTGAAGCCTATGAGGTGCTCTGTTACGTGCCTGCCCGAAGCCTACCCTAC
AACCAGCCTGGGACCTGCTACACATTGGTCGCACTGCCCAAGGAGGACCCTAGAGCTGTG
GCCTGCACATTCAGCTGCATGATGAAGTTCACTGTCAAGGACTGTGACCCCACCACTGGG
GAGACCGATGATGAAGGCTATGAAGATGAATATGTGCTGGAAGATCTGGAAGTCACTGTC
GCTGATCACATCCAGAAGGTCATGAAGCTGAACTTTGAAGCAGCGTGGGATGAGGTAGGG
GATGAGTTCGAGAAGGAGGAAACATTCACCTTGTCTACCATCAAGACACTTGAAGAGGCT
GTGGGCAATATCGTGAAATTTCTGGGAATGCACCCTTGTGAGAGGTCAGACAAAGTGCCA
GATAACAAGAACACCCATACGTTGCTCCTGGCTGGTGTGTTCCGGGGAGGTCATGACATC
TTGGTGCGCTCCCGACTGCTGCTTTTGGACACAGTAACAATGCAGGTGACAGCCAGAAGT
TCAGAGGAGCTGCCGGTAGACATCCTCTTGGCGTCTGTGGGCTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENTESKETGLSHLCEFIEDCEFTVLATRILHLLG
MKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENTESKETGLSHLCEFIEDCEFTVLAT.ILHLLG
Retrocopy
MKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENTESKETGLSHLCEFIEDCEFTVLATPILHLLG


Parental protein
QEGPKTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLER
QEGPKTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLER
Retrocopy
QEGPKTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLER


Parental protein
ALQQYTLEPSEKPFDLKSVPLATTPMAEQRTESTPITATKQPEKVAATRQEIFQEQLAAVPEFHGLGPLFKSSPEPVALTESETEYVIRCTKHTFTDHMV
ALQQYTLEPSEKPFDLKSVPLATTPMAEQRTESTPITAT.QPEKVAATRQEIFQEQLAAVPEF.GLGPLFKSSPEPVALTESETEYVIRCTKHTFTDHMV
Retrocopy
ALQQYTLEPSEKPFDLKSVPLATTPMAEQRTESTPITATNQPEKVAATRQEIFQEQLAAVPEFQGLGPLFKSSPEPVALTESETEYVIRCTKHTFTDHMV


Parental protein
FQFDCTNTLNDQTLENVTVQMEPTEAYEVLCYVPARSLPYNQPGTCYTLVALPKEDP--VACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTV
FQFDCTNTLNDQTLENVTVQMEPTEAYEVLCYVPARSLPYNQPGTCYTLVALPKEDP..VACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTV
Retrocopy
FQFDCTNTLNDQTLENVTVQMEPTEAYEVLCYVPARSLPYNQPGTCYTLVALPKEDPRAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTV


Parental protein
ADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLLLDTVTMQVTARS
ADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLLLDTVTMQVTARS
Retrocopy
ADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLLLDTVTMQVTARS


Parental protein
SEELPVDIILASVG
SEELPVDI.LASVG
Retrocopy
SEELPVDILLASVG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide