RetrogeneDB ID:
retro_mputfur_274
Organism:
Location:
GL896901.1:2529379-2529934 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
93.55 %
Coverage:
64.14 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_274
ATGGCCCCCAAATGCCAGTCTTCACTCCCGCCTCAAACGAAGAAACCGAGACAGCCTCCT
GCCCCCAAGCCAGGGCAGACATCAACATTTCAGCACTTGCATAAAAGAGAAAAAGAACAG
CAAGAAGCAACTGAACATATTGATGAAGTACAAAATGAAATAGACAGACTTAATGAACAA
GCCAGTGAGGAGATTTTGAAAGTAGAACAAAAATATAACAAACCCCGCCAACCATTTTTT
CAGAAGAGGTCGGAATTGATCGCCAAAATCCCCAATTTTTGGGTAACAACATTTGTCAAC
CATCCACAAGTGTCTGCACTGCTTGGGGAGAAGGATGAAGAGGCGCTGCATTATTTGACA
AGAGTTGAAGTGACAGAATTTGAAGATATTAAATCAGGTTACAGAATAGATTTTTATTTT
GATGAAAACCCTTACTTCAAAAATAAAGTTCTCTCCAAAGAATTTCATCTGAATGAGAAT
GGTGATCCATCTTCAAAGTCCACTGAAATAAAATGGAAATCTGGAAAGGATTTGATGAAA
CGTTCAAGTCAAACA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPKRQSSLPPQMKKPRQPPAPKPGQTSTSQHLHRGAEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFV
MAPK.QSSLPPQ.KKPRQPPAPKPGQTST.QHLH...EKEQQEA.EHIDEVQNEIDRLNEQASEEILKVEQKYNK.RQPFFQKRSELIAKIPNFWVTTFV
Retrocopy
MAPKCQSSLPPQTKKPRQPPAPKPGQTSTFQHLHK-REKEQQEATEHIDEVQNEIDRLNEQASEEILKVEQKYNKPRQPFFQKRSELIAKIPNFWVTTFV


Parental protein
NHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQT
NHPQVSALLGE.DEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYF.NKVLSKEFHLNE.GDPSSKSTEIKWKSGKDL.KRSSQT
Retrocopy
NHPQVSALLGEKDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFKNKVLSKEFHLNENGDPSSKSTEIKWKSGKDLMKRSSQT


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide