RetrogeneDB ID:
retro_mputfur_28
Organism:
Location:
GL896920.1:15895847-15896450 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
75.76 %
Coverage:
98.49 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
PRDX2
Parental gene aliases:
No gene alias available
Parental gene description:
peroxiredoxin 2 [Source:HGNC Symbol;Acc:9353]

Genomic region (view in browser)





>retro_mputfur_28
ATGTCTTCAGGAAATGCCAAAATTGGGCATCCTGCCCCCAACTTCAAAGCCACGGCTGTT
ATGCCAGATGGCCAGTTCAAAGACCTCAGCCTATCTGACTACAAAGGAAAATATGTTGTG
TTCTTCTTTTACCCTCTTGACTTCACCTTTGTGTGTCCCACGGAGATCATTGCTTTCAGT
GACAGGGCAGAAGAATTTAAGAAACTCAACTGTCAAGTGATTGGTGCTTCTGTGGATTCT
CATTTCCGTCACCTGGCATGGATCAACACACCCAAGAAACAAGGAGGACTGGGACCCATG
AACATTCCCTTGGTATCAGACCCCAAGCGTACCATTGCTCAGGACTATGGAGTCTTAAAG
GCTGATGAAGGCATCTCGTTCAGGGTCCTCTTTATCATTGATGATAAAGGCATCCTTAGG
CAGATCACTGTAAATGATGGCCTACCTGTTGGCCACTCTGTGGATGAGACTCTGCGACTG
GTTCAGGCCTTCCAGTTTACTGACAAGCATGGGGAAGTGTGCCCAGCTGGCTGGAAGCCT
GGCAGTGATACCATCAAGCCTAATGTCCAGAAGAGCAAAGAGTATTTCTCTAAGCAGAAG
TGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MASGKAHIGKPAPPFQATAVV-DGAFKEVKLCDYKGKYLVLFFYPLDFTFVCPTEIIAFSERAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPL
M.SG.A.IG.PAP.F.ATAV..DG.FK...L.DYKGKY.V.FFYPLDFTFVCPTEIIAFS.RAE.F.KL.C.V.G.SVDS.F.HLAWINTP.K.GGLGP.
Retrocopy
MSSGNAKIGHPAPNFKATAVMPDGQFKDLSLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFRHLAWINTPKKQGGLGPM


Parental protein
NIPLLADVTRNLSEDYGVLKKDEGIAYRGLFIIDGKGVLRQITVND-LPVGRSVDEVLRLVQAFQYTDEHGEVCPAGWKPGSDTIKPNVDDSKEYFSK
NIPL..D..R....DYGVLK.DEGI..R.LFIID.KG.LRQITVND.LPVG.SVDE.LRLVQAFQ.TD.HGEVCPAGWKPGSDTIKPNV..SKEYFSK
Retrocopy
NIPLVSDPKRTIAQDYGVLKADEGISFRVLFIIDDKGILRQITVNDGLPVGHSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPNVQKSKEYFSK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide