RetrogeneDB ID:
retro_mputfur_290
Organism:
Location:
GL896901.1:25643414-25643767 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
88.24 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
ATP5G2
Parental gene aliases:
No gene alias available
Parental gene description:
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842]

Genomic region (view in browser)





>retro_mputfur_290
TCCACCCCGTTCTTGGTCAGGAGCACCTCTCAGCTGTTGAGCCGATCACTGTCTGCAGTG
GTGCTAAAACCACCCGAGACACTTAGAGATGAGGCACCTTATAAGGGCCTCAGCATCTTG
GCAGCCCCACGTCCCCTGACCTCACTTATTCCTAGCCGCAGCTTCCAAACCGGCACCATT
TCAAGGGGCATCGATACAGCAGCCAAGTTCATTGGGGCTGGGGCTACCGTGGTAGGGGTG
GCTGGCTCTGGGGCTGGAACTGGGACTGTGTTTGGGAGCCTCATCATTGGTTATGCCAGG
AATCCCTCTCTGAAGCAACAGCTCTTCTTCTACGCCATTCGGGCTTTGCCCTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
STPFLVRSTSQLLSRSLSAVVLKPPETLTDE----GLSILAAPRPLTSLIPSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR
STPFLVRSTSQLLSRSLSAVVLKPPETL.DE....GLSILAAPRPLTSLIPSRSFQT..ISR.IDTAAKFIGAGA..VGVAGSGAG.GTVFGSLIIGYAR
Retrocopy
STPFLVRSTSQLLSRSLSAVVLKPPETLRDEAPYKGLSILAAPRPLTSLIPSRSFQTGTISRGIDTAAKFIGAGATVVGVAGSGAGTGTVFGSLIIGYAR


Parental protein
NPSLKQQLFSYAI-LGFAL
NPSLKQQLF.YAI..GFAL
Retrocopy
NPSLKQQLFFYAI/SGFAL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide