RetrogeneDB ID:
retro_mputfur_292
Organism:
Location:
GL896901.1:30635649-30636537 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
97.65 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_292
ATGTCTCTGTACCCATCTCTTGAAGACCTGAAGGTAGACAAAGTTATTCAGGCTCAAACT
GCCTTTTCTGCAAACCCTGGCAACCCAGCAATTTTGTCTGAAGCTTCTGCTCCCATCTCT
CAAGATGGAAATCTCTATCCTAAATTGTATCCGGAGCTCTCCCAGTACATGGGCCTGAGT
TTAAATGAAGAAGAAATCCGTGCAAATATGGCCGTGATCCCTGGAGCACCAGTTCAGGGG
CAGTTGGTGGCAAGACCTTCTAGTATGAACTATATGGTGGCTCCTGTAACTGGTAATGAT
GTTGGAATTCTTAGAGCAGAAATTAAGCAAGGGATTCATGAAGTCATTTTGTGTAAGGAT
CAAGATGGAAAAATTGGGCTCAGGCTTAAATCAATAGATAATGGCATATTTGTTCAGCTG
GTCCAGGCAAATTCTCCAGCCTCATTGGTTGGTCTGAGATTTGGGGACCAAGTACTCCAG
ATCAATGAGGAAAACTGTGCAGGTTGGAGCTCTGATAAAGCACACAAGGTACTCAAACAG
GCTTTTGGAGAGATTACTATGACTGTTCGTGACAGGCCCTTTGAACAGACAGTTACCATG
CATAAGGATAGTACTGGACATGTTGGCTTTATCTTTAAAAATGGAAAGATAACATCCATA
GTGAAAGATAGTTCTGCAGCCAGAAATGGTCTTCTCACAGAACATAACATCTGTGAAGTC
AATGGGCAGAATGTCATTGGGCTGAAGGATTCTCAAATTGCAGACATACTGTCAACATCT
GAGACTGTAGTTACTATTACAATCATGCCTGCTTTTATCTTTGAACATATTAAACGGATG
GCACCAAGCATTATGAAAAGCCTGATGGATCATACCATTCCTGAGGTT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSLYPSLEDLKVDKVIQAQTAFSANPGNPAILSEASAPISQDGNLYPKLYPELSQYMGLSLNEEEIRANMAVVPGAPVQGQLVARPSSMNYMVAPVTGND
MSLYPSLEDLKVDKVIQAQTAFSANPGNPAILSEASAPISQDGNLYPKLYPELSQYMGLSLNEEEIRANMAV.PGAPVQGQLVARPSSMNYMVAPVTGND
Retrocopy
MSLYPSLEDLKVDKVIQAQTAFSANPGNPAILSEASAPISQDGNLYPKLYPELSQYMGLSLNEEEIRANMAVIPGAPVQGQLVARPSSMNYMVAPVTGND


Parental protein
VGIRRAEIKQGIREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTVRDRPFERTVT
VGI.RAEIKQGI.EVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQIN.ENCAGWSSDKAHKVLKQAFGE.ITMTVRDRPFE.TVT
Retrocopy
VGILRAEIKQGIHEVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINEENCAGWSSDKAHKVLKQAFGE-ITMTVRDRPFEQTVT


Parental protein
MHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEVNGQNVIGLKDSQIADILSTSETVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV
MHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEVNGQNVIGLKDSQIADILSTSETVVTITIMPAFIFEH.IKRMAPSIMKSLMDHTIPEV
Retrocopy
MHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEVNGQNVIGLKDSQIADILSTSETVVTITIMPAFIFEH-IKRMAPSIMKSLMDHTIPEV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide