RetrogeneDB ID:
retro_mputfur_297
Organism:
Location:
GL896902.1:3949349-3950004 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
94.09 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_297
ATGTCGTCTCATTTAGTAGACCAGCCACCGCTCCCGCACAACAACAACAACTGCGAAGAA
GGTGAACAACCTTTGCCCCCGCCAGCCGGCCTCAACAGTTCCTGGGTGGAGCTACCCATG
AACAGCAGCAATGGCAATGATAATGGCAATGGGAAAAATGGGGGGCTAGAACATGAACCA
TCCTCATCCTCTATCCACAATGGAAACATGGAGAAGATTCTTTTGGATGCACAACACAAA
TCAGGACAGAGTAGTTCAAGAGCCAGTTCTCACTGTGACAGCCCTTCCCCACAAGAAGAT
GGGCAGATTATGTTTGATGTGGAGATGGCACACCAGCAGGGACCATAGCTCTCAGTCAGA
AAAAGAAGTTGCAGAAGGAGAGAAAGAAGTTGATTTGTTGAAGAAAAGCGTTGACTGGGT
GTCTGACTGGTCCAGTAGACCTGAAAACATTCCACCTAAGGAGTTCCACTTCAGACACCC
CAAGTGCTCTGTCTCTTTAAGCATGAGGAAAAGTGGGGCCATGAAGAAAGGGAGTATTTT
CTCTGCAGAATTCCTTAAGGTGTTCATTCCTTCTCTCTTCCTCTCTCATGTTTTGGCTTT
GGGCCTAGGCATCTATATTGGAAAGTGACTTGGCACACCTTCTGCCAGCACCTAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSSHLVEQPPPPHNNNNNCEEGEQPLPPPAGLNSSWVELPMNSSNGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRASSHCDSPSPQE
MSSHLV.QPP.PHNNNN.CEEGEQPLPPPAGLNSSWVELPMNSSNGNDNGNGKNGGLEH.PSSSSIHNG.MEKILLDAQH.SGQSSSRASSHCDSPSPQE
Retrocopy
MSSHLVDQPPLPHNNNN-CEEGEQPLPPPAGLNSSWVELPMNSSNGNDNGNGKNGGLEHEPSSSSIHNGNMEKILLDAQHKSGQSSSRASSHCDSPSPQE


Parental protein
DGQIMFDVEM-HTSRDHSSQSEEEVAEGEKEVDALKKSVDWVSDWSSRPENIPPKEFHFRHPKRSVSLSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVL
DGQIMFDVEM.HTSRDHSSQSE.EVAEGEKEVD.LKKSVDWVSDWSSRPENIPPKEFHFRHPK.SVSLSMRKSGAMKKG.IFSAEFLKVFIPSLFLSHVL
Retrocopy
DGQIMFDVEM\HTSRDHSSQSEKEVAEGEKEVDLLKKSVDWVSDWSSRPENIPPKEFHFRHPKCSVSLSMRKSGAMKKGSIFSAEFLKVFIPSLFLSHVL


Parental protein
ALGLGIYIGKRLSTPSASTY
ALGLGIYIGK.L.TPSASTY
Retrocopy
ALGLGIYIGK*LGTPSASTY


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide