RetrogeneDB ID:
retro_mputfur_301
Organism:
Location:
GL896902.1:21725157-21725632 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
71.08 %
Coverage:
100.0 %
Frameshifts:
5
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_301
ATGGCTAGGCGAAAACTTGTTCTAAAATTCTTTGACCGGGTAACTTTCGGGGAGATCATA
TCCTGAAACCAGAAGGCCATTTTTGACTCCCCGAAATCCTGGAAAGAGACACCTACCTCC
AAATTGGCTACTATCCTGAGAAACCACTTGCTATCGACTGGGCTTATTAGAAAGCCAATG
TGGCAAATGCTGGGTTGGTAGATGACTTTGAGAAGAAGTTTAGTGCCCTGAAGGTTCCCG
TGCCAAGAGTAAATATACTGTTGGGATGGATGCTGAAGAAAAAGAAGATGTGAACAGTTG
TGCTGACCTTTGTCTTTCTCAAAGGCCAGAATTGAGGAATATAAAAAAGAGCTGGAGAAG
ATGAAGAACTTAATTCCATTTGACTAGTGACCTTTGAAGACCTGAAGAAGTCTTCCCAGA
AACCAAATTAGACAAGAAGTATTCCTATTGGCTTTAGAAGCCAATTGAAAATGTA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAGRKLALKTIDWVAFGEIIPRNQKAIANSLKSWNETLTSKLATL-PEKPPAIDWAYYKANVAKAGLVDDFEKKFNALKIPVP-EDKYTVQVDAEEKEDV
MA.RKL.LK..D.V.FGEII..NQKAI..S.KSW.ET.TSKLAT..PEKP.AIDWAY.KANVA.AGLVDDFEKKF.ALK.PVP...KYTV..DAEEKEDV
Retrocopy
MARRKLVLKFFDRVTFGEIIS*NQKAIFDSPKSWKETPTSKLATI/PEKPLAIDWAY*KANVANAGLVDDFEKKFSALKVPVP/KSKYTVGMDAEEKEDV


Parental protein
KSCAEF-LSLSKARIVEYEKQLEKLRNIIPFD-QMTIEDL-NEAFPETKLDKKKYPYWPHKPIENL
.SCA...LS.SKARI.EY.K.LEK..N.IPFD...T.EDL..E.FPETKLD.KKY.YW..KPIEN.
Retrocopy
NSCADL/LSFSKARIEEYKKELEKMKNLIPFD/LVTFEDL/EEVFPETKLD-KKYSYWL*KPIENV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide