RetrogeneDB ID:
retro_mputfur_306
Organism:
Location:
GL896902.1:20262301-20262543 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.85 %
Coverage:
51.27 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
RPS11
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S11 [Source:HGNC Symbol;Acc:10384]

Genomic region (view in browser)





>retro_mputfur_306
CAGGATGCCACTGAGGGCACTTCTATTGGCAAGAAATTCTCCTTCTCTGGTAATGTCTTT
ATCCGAGGTGGATTCTGTCTGGTGTGGTGACCAAAGTGAAAATGCAGAGGACCACTGTCA
TCTACAAAAACTACCTCTTCTAAATCCAAAAGTACAACTGCTTCAAGAAATGCCACAAGA
ACATGTCTGTGTACCTGTCCTCCTGCTTCAGGGATGGAAAGTTTGGTGATGTTGTCACAG
TG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KEAIEGTYIDKKCPFTGNVSIRGR-ILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTV
..A.EGT.I.KK..F.GNV.IRG..ILSGVVTK.KMQRT.VI...YL..I.KYN.F.K.HKNMSV.LS.CFRD...GD.VTV
Retrocopy
QDATEGTSIGKKFSFSGNVFIRGG/ILSGVVTKVKMQRTTVIYKNYLF*IQKYNCFKKCHKNMSVYLSSCFRDGKFGDVVTV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide