RetrogeneDB ID:
retro_mputfur_308
Organism:
Location:
GL896902.1:29984608-29985178 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
92.11 %
Coverage:
99.48 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_308
ATGCAGACAATTAAGTGTGTTGTTGTGGGCAATGGTGCCGTTGGTAAAACATGTCTCCTG
ATATCCTACACAACAAACAAATTTCCATCTGAGTATGTACCGACTGTTTTTGACAACTAT
GCAGTCACAGTTATGATTGGTGGAGAGCCATATACTCTTGGACTTTTTGATACTGCAAGG
AAAGAGGATTATGACAGATTACGACCTCTGAGTTATCCACAAACAGATGTATTTCTAGTC
TGTTTTTCAGTCGTCTCTCCATCCTCATTTGAAAATGTGAAGGAAAAGTGTGTTCCTGAG
ATAACTCACCATTGTCCAAAGACTCCTTTCTTGCTTGTTGGGACCCAAATTGATCTCCGA
GATGACCCCTCTACTATTGAGAAACTTGCCAAGAACAAACAGAAGCCTATCACTCCAGAG
ACTGCTGAAAAGCTGGCCTGTGACCTGAAGGCAGTCAAGTATGTGGAGTGTTCTGCACTC
ACACAGAAAGGCATAAAGAATGTATTTGACGAAGCAATATTGGCTGCCCTGGAGCCTCCC
GGACCGAAGAAGAGCCGCAGGTGTGTGCTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE
MQTIKCVVVG.GAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA..EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEK.VPE
Retrocopy
MQTIKCVVVGNGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTARKEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKCVPE


Parental protein
ITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFDEAILAALEPPETQPKRKCCI
ITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLA.DLKAVKYVECSALTQ.G.KNVFDEAILAALEPP.....R.C..
Retrocopy
ITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLACDLKAVKYVECSALTQKGIKNVFDEAILAALEPPGPKKSRRCVL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide