RetrogeneDB ID:
retro_mputfur_31
Organism:
Location:
GL896990.1:6052816-6053818 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
72.87 %
Coverage:
98.2 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_31
ATGGTAAAATTCGGAGAAAATGGATTTGGCCTTATTGGGCACCTAGTCACCAGGACTGCT
TTTAACTCTGACAAAGTGCATATTATCACCATCAGTGACTCCTTCATTGGCTTCAACTAC
ATGGTGTACATGTTCCAGTATGACGCCACTCATAGAAAATTCCATGGCACAGTCAAGGCT
GAGAATGGGAAACTTATTGTCAGTGGAAAGCCCATCTCCATCTTCCAGGAGCGAGATCCT
ACCAACTTCAAATGGGATGGTTCTCGTGCTGAGTATGTTATAGAGTCCACTGGGGCATTC
ACCACCTTGGCGAAGGCTGGGGCTCACTTGAAGAATGGGGCCAGGAGGGTCCTCATCTCT
GCCCCTCCTGCTGATGCCCCCATATTTGTAATGGGTTTGAATCATGAGAAGTATGATAAC
TCCTTCAAGATTGCCAGCAATGTCTTCTGCACCATCAGCTGCTTGGCTCCTCAAGTCATG
GTCACCTGTGACAACGTCAGTATTGTGGAGGGACTCATGGCCACAGGTCATACCATCACT
GCTACCCAGAAGACTTTGGATAGCTCCTTTGGGAAGCTCTGGTGTGATGGCCCAGGGGCT
GCCCAGAACATCATTCCTGTTTCTACTGGCACTGCCAAGACTGTAGACAAGGTAATCTCT
GAGCTGAATGGGAAGCTCCCTAGCATGGCCTTCTGTGACTCCACTTCCAATGTATCAGTC
GTGGATCTGACCTGCCACCTGGAGAAAGTTGTCAAATATAATGACATCAAGAAGGTGGTA
AAACAGGCATCAAAGGGCCCCCTCAAGGGCATCCTGGATTATAATAAGGACCAGGTTGTC
TTGAACAGTGACTTTAACAGTGATACCTGCTCTTCCACCTTTGATGCTGGGGCAGGCATT
GCTTTCAATGACCACTTTGTCAAGCTCATTTTCTGGCATGACAACGAATGGGGCTGCAGC
AACCAGGCAGTAGACGTTATGGTTTCCACATGGCCTCCAAGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAENGKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVF
MVK.G.NGFG.IG.LVTR.AFNS.KV.I..I.D.FI..NYMVYMFQYD.TH.KF.GTVKAENGKL...GK.ISIFQERDP.N.KW....AEYV.ESTG.F
Retrocopy
MVKFGENGFGLIGHLVTRTAFNSDKVHIITISDSFIGFNYMVYMFQYDATHRKFHGTVKAENGKLIVSGKPISIFQERDPTNFKWDGSRAEYVIESTGAF


Parental protein
TTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGA
TT..KAGAHLK.GA.RV.ISAP.ADAP.FVMG.NHEKYDNS.KI.SN..CT..CLAP...V..DN..IVEGLM.T.H.ITATQKT.D...GKLW.DG.GA
Retrocopy
TTLAKAGAHLKNGARRVLISAPPADAPIFVMGLNHEKYDNSFKIASNVFCTISCLAPQVMVTCDNVSIVEGLMATGHTITATQKTLDSSFGKLWCDGPGA


Parental protein
AQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVV-SCDFNSDTHSSTFDAGAGI
AQNIIP.STG.AK.V.KVI.ELNGKL..MAF...T.NVSVVDLTC.LEK..KY.DIKKVVKQAS.GPLKGIL.Y..DQVV...DFNSDT.SSTFDAGAGI
Retrocopy
AQNIIPVSTGTAKTVDKVISELNGKLPSMAFCDSTSNVSVVDLTCHLEKVVKYNDIKKVVKQASKGPLKGILDYNKDQVVLNSDFNSDTCSSTFDAGAGI


Parental protein
ALNDHFVKLISWYDNEFGYSNRVVDLMV
A.NDHFVKLI.W.DNE.G.SN..VD.MV
Retrocopy
AFNDHFVKLIFWHDNEWGCSNQAVDVMV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide