RetrogeneDB ID:
retro_mputfur_314
Organism:
Location:
GL896903.1:4333536-4334093 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
71.73 %
Coverage:
91.67 %
Frameshifts:
4
Stop codons:
5


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_314
ATGGACACTTACAAGTACATCCAGGAGCAGTGGAGGAAGAGGCCATCTGATGTAATTTGC
TTTCCTCTCAGGGTGTGCTGCTGATAGTACCCCAGTTTTCTGTGCTCCACAGGGCCCCCT
GCCCAACCAAGCCTGATAGAGCACGCAGACTGGGTTACAAGGCCAAGCAAGGTTATGTCA
TACGTCGGATTCATGTGCGACATGATGACCACAAATGCTGAGTTTTAAGGGTGCTACCTA
TGGCAATCCTGTCCATCATGGTGTTAACCAGCTGAAGTTTGCCCCAAGCCTTCATCTGTT
GTAGAGGAGTGAGCTGGACACCACTGTGGGACTATGAGAGTCTTGAATTTTTACTGCATT
GGTGTAGATTGCATGTACAAATTCTTTGAGGTTATCCTTATTGCTCCATTCCATAAAGCT
ATCAGAAAAATCCTGACACCCAGTGGATCACCAGACCAGTCCACAAGCACAGGGAGATAT
GAGGGCTGACATCTGTAGGCTGCAAGAGCCATGGCCTTGGAAAGGGTCACAAGTTCCACC
ACACTACTGGTGGTTCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MGAYKYIQELWRKKQSDVMRFLLRVRCWQYR-QLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPK-GATYGKPVHHGVNQLKFARSL
M..YKYIQE.WRK..SDV..F.LRV.C..Y..Q.S.LHRAP.PT.PD.ARRLGYKAKQGYVI.RI.VR....K..V...GATYG.PVHHGVNQLKFA.SL
Retrocopy
MDTYKYIQEQWRKRPSDVICFPLRVCC**YP/QFSVLHRAPCPTKPDRARRLGYKAKQGYVIRRIHVRHDDHKC*VLR/GATYGNPVHHGVNQLKFAPSL


Parental protein
-QSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIR-RNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGS
..SV.EE.AG.HCG..RVLN.Y..G.D..YKFFEVILI.PFHKAIR..NPDTQWIT.PVHKHRE..GLTS.G.KS.GLGKGHKFHHT.GGS
Retrocopy
/SSVVEE*AGHHCGTMRVLNFYCIGVDCMYKFFEVILIAPFHKAIR/KNPDTQWITRPVHKHREI*GLTSVGCKSHGLGKGHKFHHTTGGS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide