RetrogeneDB ID:
retro_mputfur_315
Organism:
Location:
GL896903.1:4575007-4575229 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
82.43 %
Coverage:
52.48 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
VAMP4
Parental gene aliases:
No gene alias available
Parental gene description:
vesicle-associated membrane protein 4 [Source:HGNC Symbol;Acc:12645]

Genomic region (view in browser)





>retro_mputfur_315
ATGCCTCCCAAGTTCAAGCATCACCTAAATGATGATGATGTCACTGGTTCTGTGCAAAGT
GAAAAGAGAAATCTTTTGGAAGATGATTCAGATGAAGAAGAGGACTTTTTTCTCAGGGGA
TCATCTGGACCAAGATTTGCACCTAGAAATGATGAAATTAAGCATTTTCAGAATCAAGCA
AATAAAATTATTGATAGCATGCAAGAAAATATTACAAAGTTA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MPPKFKRHLNDDDVTGSVKSERRNLLEDDSDEEEDFFLRGPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKV
MPPKFK.HLNDDDVTGSV.SE.RNLLEDDSDEEEDFFLRG.SGPRF.PRND.IKH.QNQ....ID.MQENITK.
Retrocopy
MPPKFKHHLNDDDVTGSVQSEKRNLLEDDSDEEEDFFLRGSSGPRFAPRNDEIKHFQNQANKIIDSMQENITKL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide