RetrogeneDB ID:
retro_mputfur_317
Organism:
Location:
GL896903.1:6682228-6682736 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
78.24 %
Coverage:
50.75 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_317
GACCTCAACTACACAGTCTACATGTTCCACTATGATTCCACCAATGGCAGATTCCATGGC
ATAGGCAAGGCTGAGAATGGGAAACTTGTCATCAATGGAAAGCCCCTCTCCATCTTCCAG
GAGCAAGATCCTGCCAACATCAAATGGGGTGATGCTGGTGCTGAGTATGTTGTGGAGTCC
ATTGGGGTCTTCACCACCATGGAGGAGGCTGGGGCTCACTTGAAAGGTGGGAACTGAGAC
AGTCATCATCTCTGCCCCTTGTGTTGATACCCCCATGTCTGTGAGGGGCATGAACCTTGA
GAAGTAAGACAACTCCCTCAAGACTGTCAGTAATGCCTCCTGTACCACCAACTGATTAGC
TCCTCTGGTCAAGGTCATCCATGACAATTTTGACATTGTGGAGGGACTCGTGACCACAGT
CTATGCCATCACTGTCATTCAGAAGACTGCGGACAGCCCCTCTGGGAAGCTGTGGTGTTA
TGGCCAAGGGGCTGCTCAGAACATCATC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
DLNYMVYMFQYDSTHGKFNGTVKAENGKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKG-GAKRVIISAPSADAPMFVMGVNH
DLNY.VYMF.YDST.G.F.G..KAENGKLVINGK..SIFQE.DPANIKWGDAGAEYVVES.GVFTTME.AGAHLKG.G...VIISAP..D.PM.V.G.N.
Retrocopy
DLNYTVYMFHYDSTNGRFHGIGKAENGKLVINGKPLSIFQEQDPANIKWGDAGAEYVVESIGVFTTMEEAGAHLKG\GTETVIISAPCVDTPMSVRGMNL


Parental protein
EKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNII
EK.DNSLK.VSNASCTTN.LAPL.KVIHDNF.IVEGL.TTV.AIT..QKT.D.PSGKLW..G.GAAQNII
Retrocopy
EK*DNSLKTVSNASCTTN*LAPLVKVIHDNFDIVEGLVTTVYAITVIQKTADSPSGKLWCYGQGAAQNII


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide