RetrogeneDB ID:
retro_mputfur_32
Organism:
Location:
GL896982.1:2364617-2365268 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.15 %
Coverage:
93.51 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:G9K3H0]

Genomic region (view in browser)





>retro_mputfur_32
ATGGCGGCTCGGTGTGTGAGGCTGGCGGGGCAAAGTCTCCCAGCTTACCTGTCTCTCAGA
CCATCTCCTCGGCTGCTGTGCACAGCTACAAAACAGAAGAACAGTGGCCAGAACCTGGAA
GAGGTCGTGAGTCAGAATGAACAGAAGACAGATACTCCTTCCCCAGAGAAGATACTCCTG
GACGAGAAGGTCAAGCTAGAAGAGCAGCTGAAGGAGACTGTGGAAAAATATAAGCGAGCT
TTGGCAGACACTGAGAACTTGAGGCAGAGGAGCCAGAAGTTGGTGGAGGAGGCAAAATTA
TACGGCATCCAGGGCTTCTGTAAGGACTTGCTGGAGGTCGCAGATATCTTGGAGAAGGCG
ACGCAGAGTGTCCCGAAGGAGGAGGTCAGAGACGACAATCCTCACCTCAAGAACCTCTAT
GAGGGGCTCCTGATGACGGAGGTCCAGATCCAGAAGGTGTTCACCAAACACGGCTTGCTG
CTGCTGAACCCCGTGGGTGCCAGGTTCGACCCCTATGAGCACGAGGCCCTGTTCCACACA
CCAGTGGAGGGCAAGGAGCCCGGCACGGTGGCGCTGGTCAGCAAAGTGGGGTACAAGCTG
CACGGGCGCACCCTGAGACCCGCACTGGTGGGGGTGGTGAAGGCAGCTTAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAARCVRLARQSLPAYLSLRPSPRLLCTAMKQKNSGQNLEEDVSQNEQKTDTPSPEKILLDEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKL
MAARCVRLA.QSLPAYLSLRPSPRLLCTA.KQKNSGQNLEE.VSQNEQKTDTPSPEKILLDEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKL
Retrocopy
MAARCVRLAGQSLPAYLSLRPSPRLLCTATKQKNSGQNLEEVVSQNEQKTDTPSPEKILLDEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKL


Parental protein
YGIQGFCKDLLEVADILEKATQSVPKEEVRDDNPHLKNLYEGLLMTEVQIQKVFTKHGLLRLNPVGARFDPYEHEALFHTPVEGKEPGTVALVSKVGYKL
YGIQGFCKDLLEVADILEKATQSVPKEEVRDDNPHLKNLYEGLLMTEVQIQKVFTKHGLL.LNPVGARFDPYEHEALFHTPVEGKEPGTVALVSKVGYKL
Retrocopy
YGIQGFCKDLLEVADILEKATQSVPKEEVRDDNPHLKNLYEGLLMTEVQIQKVFTKHGLLLLNPVGARFDPYEHEALFHTPVEGKEPGTVALVSKVGYKL


Parental protein
HGRTLRPALVGVVKAA
HGRTLRPALVGVVKAA
Retrocopy
HGRTLRPALVGVVKAA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide