RetrogeneDB ID:
retro_mputfur_320
Organism:
Location:
GL896903.1:12827095-12827443 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
68.29 %
Coverage:
100.0 %
Frameshifts:
5
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_320
GCTTTTAAAGACACCAGGAGACACCCGTGGAAACAGAGGCGGAATTCAACAAATTAGAAT
TACTCTAACCAGCACAATGTAAAATCTTTGGAGAAGGTATCTGCAACTAGATCAGAGGGA
CAAAGAAGAATCTCAAAGTATAAAGACAACTTTGGATGCCTACCACGACTCTGAAAATCA
CTACAAGGAAAACTCCTTGTAGTGAAGGTTCTAAAATTTGGGATCATTTTCAGATGAGGA
TCCACAAGCAACTCACTGACTTGCACCGTCCTTTTGAGATTACTAAAGCAAATTACGTTC
ATCACTACTAAGCCAGGAGTTGAGGCTGAAGTCACCATTGCACATGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AFKDTGK-TPVEPEV-AIHRIRITLTS-RNVKSLEKVCADL-IRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEI
AFKDT...TPVE.E...I..IRITLTS..NVKSLEKV.A...IRG.K.KNLKV.....MPT.TL.ITTRKTPC.EGSK.WD.FQMRIHK.L.DLH.P.EI
Retrocopy
AFKDTRR/TPVETEA/GIQQIRITLTS/HNVKSLEKVSATR/IRGTK-KNLKV*RQLWMPTTTLKITTRKTPCSEGSKIWDHFQMRIHKQLTDLHRPFEI


Parental protein
-VKQITSISIEPGVEVEVTIADA
..KQIT.I...PGVE.EVTIA.A
Retrocopy
\LKQITFITTKPGVEAEVTIAHA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide