RetrogeneDB ID:
retro_mputfur_329
Organism:
Location:
GL896903.1:14917331-14917896 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
67.36 %
Coverage:
68.95 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
EGFL7
Parental gene aliases:
No gene alias available
Parental gene description:
EGF-like-domain, multiple 7 [Source:HGNC Symbol;Acc:20594]

Genomic region (view in browser)





>retro_mputfur_329
CCCCGCTCTGCTTGGTGGCCTGGCTGGAAGAGGACCAGCAGGTTCCCCAGGGCTGGTGGA
GTAGCAATATGCCAGCCACCCTCCCGGGATGGAGGAAGCTATGTCCAGCCAGGCCTCTGT
CGCCACTCTGCAGGATGGCAGGGCGACATCTGCCAGACAGACATGGACAAATGCAGTGCT
GGAGGGGGCACCTGTACCCTGCACTGTGTCAGCACCATGGCTAGTTACCGGTGCCAGAAA
GGGCAAAGCCCATCTGCAGATGGTGTGCTCTGCCTGCCCAAGTCAAGGACTCCCAGGGAA
GCTCCGAACCCTACGACAGGAATGGACAGTGCAGTAGAGGAAGAGGTGCGGATGCTTCAG
TCCAGAATGGATGTGCTGGAGGAGAAGGGGCAGCTGGTGCTGCCCCACTGCACAGCCAGG
CCTCAAGGGCCCGGGAGCACAGGCTGCCTGACCCCAGCAGACTCCCCAGTTACTCCTTCC
AGCAGCTGGACCGCATCGGCTCTCTGCGAGAGCGATCTCCTTCCTGGAGGAGCAGCTGGG
CTTCTGTTCCTGCAAGAAGGAGCTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PRYACCPGWKRTSGLPRACGAAICRPPCQNGGTCVQPGRCHCPAGWRGDTCQIDVDECRAGQGTCPQHCVNTAGSYWCQCREGHGRSADGALCLPETGTP
PR.A..PGWKRTS..PRA.G.AIC.PP...GG..VQPG.C...AGW.GD.CQ.D.D.C.AG.GTC..HCV.T..SY...C..G...SADG.LCLP...TP
Retrocopy
PRSAWWPGWKRTSRFPRAGGVAICQPPSRDGGSYVQPGLCRHSAGWQGDICQTDMDKCSAGGGTCTLHCVSTMASY--RCQKGQSPSADGVLCLPKSRTP


Parental protein
RVAPNPTTGVDSAVEEEVQKLRSRVDVLEQKLQLVL-APLHSLASRALEHGLPDPSSLLAHSFQQLDRIDSLSEQ-ISFLEEQLGSCSCKEEL
R.APNPTTG.DSAVEEEV..L.SR.DVLE.K.QLVL.APLHS.ASRA.EH.LPDPS.L...SFQQLDRI.SL.E..ISFLEEQLG.CSCK.EL
Retrocopy
REAPNPTTGMDSAVEEEVRMLQSRMDVLEEKGQLVL/APLHSQASRAREHRLPDPSRLPSYSFQQLDRIGSLRER/ISFLEEQLGFCSCKKEL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide