RetrogeneDB ID:
retro_mputfur_335
Organism:
Location:
GL896904.1:6921561-6921904 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
73.91 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
ATP5G2
Parental gene aliases:
No gene alias available
Parental gene description:
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842]

Genomic region (view in browser)





>retro_mputfur_335
TCCACCGCTTTCTTGATCAGGAGCACCACTGAGCTGTTGAGCCCACCACGGTCTGCAGTG
GTGCTAAAACCACCAGAGACACTGGCTGATCAAAGCCTCAGCAGCTGGGCGGCTCCATGC
CCCCTGACCTCACTCATCCCTAGACACAGCTTCCAAACCAGCGCCATTTCAAGGGACATC
AACACCACAGCCAAGTTCATCAGGGCTGGGGTTGCCACGGTTGGGGATAGCTGGTTCTGG
GGCTGGCTCTGGGGCTGAGTTTGGGAGCCTCATCACTGGTTATGCCAGCAACCCCTCTCT
GAAGCAATGGTTCTTCTCCTACACCATTCTGGGCTTTGTCCTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
STPFLVRSTSQLLSRSLSAVVLKPPETLTDEGLSILAAPRPLTSLIPSRSFQTSAISRDIDTAAKFIGAGAATV-GVAGSGAGIGTVFGSLIIGYARNPS
ST.FL.RST..LLS...SAVVLKPPETL.D..LS..AAP.PLTSLIP..SFQTSAISRDI.T.AKFI.AG.ATV.G.AGSGAG.G..FGSLI.GYA.NPS
Retrocopy
STAFLIRSTTELLSPPRSAVVLKPPETLADQSLSSWAAPCPLTSLIPRHSFQTSAISRDINTTAKFIRAGVATV\GIAGSGAGSGAEFGSLITGYASNPS


Parental protein
LKQQLFSYAILGFAL
LKQ..FSY.ILGF.L
Retrocopy
LKQWFFSYTILGFVL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide