RetrogeneDB ID:
retro_mputfur_345
Organism:
Location:
GL896904.1:2264632-2264936 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
70.19 %
Coverage:
64.56 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
RPS11
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S11 [Source:HGNC Symbol;Acc:10384]

Genomic region (view in browser)





>retro_mputfur_345
GACAAGAGACGCCCCTTTCCTGGCAATGTCTCCATCCAAGGGTGGATTCTGTCCAGTGTG
GTGACCACGGTGAAGACACAGAGGACCTCTGTCATCTGCCGAGACTACCTCTGCTACCCC
CAAAACTACAAGCTCTTTGAGAAAGGACATAAGCGTATGTCTGTGCACCTGTCCCCTGCT
GCAGGGATGTCCAGATCGGCGACATCATTGCAGTGGACGAGTGCCGGCCCTTGAGCGAGA
CTGTGCATTTAAAGGTGCCCAAGTCACCAGGGCTGCTGGCACCAAGAAACAATTCCAGAA
GTTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
DKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSP-CFRDVQIGDIVTVGECRPLSKTVRFNVLK-VTKAAGTKKQ
DK..PF.GNVSI.G.ILS.VVT..K.QRT.VI.RDYL.Y...Y..FEK.HK.MSVHLSP.C.RDVQIGDI..V.ECRPLS.TV...V.K.VT.AAGTKKQ
Retrocopy
DKRRPFPGNVSIQGWILSSVVTTVKTQRTSVICRDYLCYPQNYKLFEKGHKRMSVHLSP/CCRDVQIGDIIAVDECRPLSETVHLKVPK/VTRAAGTKKQ


Parental protein
FQKF
FQKF
Retrocopy
FQKF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide