RetrogeneDB ID:
retro_mputfur_350
Organism:
Location:
GL896904.1:19564587-19564986 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
53.52 %
Coverage:
77.71 %
Frameshifts:
6
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_350
CAGGATGTTATGGTGTTGGAGGACATGGACCACTTTTTCCCCGCGTTGCCCAAAGAAAAT
TGAGAGGGCTCCCAGCATCTTGAATATGCAAAACCAGTGTGTGGCCGCTTTCTTCCAGGA
CCTGCAGAAGTTATACCAAAATGAACAGGCTAAAACCTTGGAGTCATGCAGACTGCAATA
GTCCTAGGGAAGAAACTGAACCAGTCCTTTTCGGTCTGCAGATCCTGGGTCCTGCCTGCA
CCGACCTCCAACTCCGTGGCTTCCTGGAGAGCCACTTCCTAGATGAGAAGGTGAAACTCA
TCAAGAAGATGATGAACACCTAACTAACGTCTGCAGTTTGGCTGGCTGGCTTCAAAGCTG
GGCAAGTATCTCTTTAAAAGGCTCACCCTCAAGCATGAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RDDVALEGVGHF-FRELAEEKREG-AERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDA-MEAALVLEKSLNQA-LLDLHALGSARTDPHLCDFLENHFL
.D...LE...HF.F...A..K..G.A...L.MQNQ....A.FQD.QK..Q.E..KTL...M..A.VL.K.LNQ..L..L..LG.A.TD..L..FLE.HFL
Retrocopy
QDVMVLEDMDHF/FPRVAQRKLRG/APSILNMQNQCVA-AFFQDLQKLYQNEQAKTLES/MQTAIVLGKKLNQS/LFGLQILGPACTDLQLRGFLESHFL


Parental protein
DEEVKLIKKM-GDHLTNLRRLAG-PQAGLGEYLFERLTLKHD
DE.VKLIKKM...HLTN...LAG.....LG.YLF.RLTLKHD
Retrocopy
DEKVKLIKKM/DEHLTNVCSLAG/LASKLGKYLFKRLTLKHD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide