RetrogeneDB ID:
retro_mputfur_352
Organism:
Location:
GL896904.1:27206344-27206653 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
87.74 %
Coverage:
59.22 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
ARL5A
Parental gene aliases:
No gene alias available
Parental gene description:
ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696]

Genomic region (view in browser)





>retro_mputfur_352
ATGGGAATTCTCCTCACCAGGATATGGAGACTCTTCAATCACCAGGAGCACAGAGTTATC
ATTGCTGGGCTGGATAATGCAGGGAAAACTACCATCCTTTACCAGTTTTCTATGAATGAA
CTTGTACATACATCACCTACAACAGGAAGTAACATAGAAGAAATAGTGATTAATAATACA
CATTTTCTAATGTGGGATATTGGTGGCCAAGAATCTCTTTCAAACACTTACTATACTAAC
ACAGAGTTTGTAATAGTTGCTGTGGACAGTACAGACAGAGAAAGGATTTCTGTAACTAGA
GAAGAGGTA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MGILFTRIWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERIS
MGIL.TRIWRLFNHQEH.VII.GLDNAGKTTILYQFSMNE.VHTSPT.GSN.EEIVINNT.FLMWDIGGQESL....NTYYTNTEFVIV.VDSTDRERIS
Retrocopy
MGILLTRIWRLFNHQEHRVIIAGLDNAGKTTILYQFSMNELVHTSPTTGSNIEEIVINNTHFLMWDIGGQESLS---NTYYTNTEFVIVAVDSTDRERIS


Parental protein
VTREEL
VTREE.
Retrocopy
VTREEV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide