RetrogeneDB ID:
retro_mputfur_353
Organism:
Location:
GL896905.1:1469572-1470043 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
90.45 %
Coverage:
59.92 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
SRSF10
Parental gene aliases:
No gene alias available
Parental gene description:
serine/arginine-rich splicing factor 10 [Source:HGNC Symbol;Acc:16713]

Genomic region (view in browser)





>retro_mputfur_353
ATGTCCCGCTACCTGCACCCCCCCAATATGTCTCTGTTCATAAGGAATGTGGCCAACGAC
ACCAGGTCTGAAGATTTACGACGAGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTAT
GTTCCACTTGATTTCTACACGTACCGTCCAAGAGGATTTGCTTATGTTCAATTTGAGGAT
GTCCGTGATGCCAAAGATGCTTTACATAATTTGGACACAAAATGGATTTGCAGATGCCAA
ATTGAAATACAGTTTGCACAAGGGGATCGGAAGATTCCAAATCAAATGAAAGCCAAGGAA
GGGAGGAATGTGTACAGCTCTTCACGCTATGATGATTATGACAGATACAGACATTCTAGA
AGCCGGAGTTATGAAAGAAGAAGATCAAGAAGCTGGTCCTTTGATTACAACTATAGAAGA
TATTAGAGTCCTAGAAACAGTAGACCGGCTGGAAGACCACGGCCTAGCAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE
MSRYL.PPN.SLF.RNVA.DTRSEDLRREFGRYGPIVDVYVPLDFYT.RPRGFAYVQFEDVRDA.DALHNLD.KWIC..QIEIQFAQGDRK.PNQMKAKE
Retrocopy
MSRYLHPPNMSLFIRNVANDTRSEDLRREFGRYGPIVDVYVPLDFYTYRPRGFAYVQFEDVRDAKDALHNLDTKWICRCQIEIQFAQGDRKIPNQMKAKE


Parental protein
GRNVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNSRPAGRPRRSR
GRNVYSSSRYDDYDRYR.SRSRSYERRRSRS.SFDYNYRR..SPRNSRPAGRPR.SR
Retrocopy
GRNVYSSSRYDDYDRYRHSRSRSYERRRSRSWSFDYNYRRY*SPRNSRPAGRPRPSR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide