RetrogeneDB ID:
retro_mputfur_355
Organism:
Location:
GL896905.1:4687097-4687754 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
79.45 %
Coverage:
55.03 %
Frameshifts:
0
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_355
ATGGGAAGGGAAAAGACTCACATCAACATCATCATCATTGGACACATAGATTAGGGCAAG
TCTACCACTACTGGTCATTTGATCTACAAATGTGGTGGGACTGACAAAAGAACTACTGAA
AAACTTGAGAAGGAGTATGCTGAGATGGGCAAGGACTCCTTGAAATATGCTTGGTTTTAG
AATAAACTGAAAGATGAACGTGAACGAGATATCACCACTGATATCTCCTTGTAGAAATAT
GAGACCAGCAAGTATTATTTGACCATCACTGATGCCCTAGGCTATGGAGACTTTATCAAA
AACATGATATTAGGCACATCTCAGGGTGACTGTGTTGTCTTAATTATTGCTGCTGGTGTT
TGTGAATTTGAAGAAGGTAGCTCCAAGAATGGGCAGACCCATGAGCATGACCTTCTGGCT
TACACACTGGGTGTAAAACAACTAATTGTTGGTGTTAACAAAATGGATTCCATTGAGCCA
CCCTACAGCCAGAAGAGATACAAGGAAATCATTAAGGAAGCCAGCACCTTCATTAAGAAA
ATTGGCTATAACCCTGACGCAGTAGAATTTGTGCCAATTCCTGGTTGGAATGGTGACAAC
ATGCTGGAGCCAAGTGCTAACATGCCTTGGTTAAAAGTATGGGAAGTCACCAGTAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIK
MG.EKTHINI..IGH.D.GKSTTTGHLIYKCGG.DKRT.EK.EKE.AEMGK.S.KYAW...KLK.ERER.IT.DISL.K.ETSKYY.TI.DA.G..DFIK
Retrocopy
MGREKTHINIIIIGHID*GKSTTTGHLIYKCGGTDKRTTEKLEKEYAEMGKDSLKYAWF*NKLKDERERDITTDISL*KYETSKYYLTITDALGYGDFIK


Parental protein
NMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDN
NMI.GTSQ.DC.VLI.AAGV.EFE.G.SKNGQT.EH.LLAYTLGVKQLIVGVNKMDS.EPPYSQKRY.EI.KE.ST.IKKIGYNPD.V.FVPI.GWNGDN
Retrocopy
NMILGTSQGDCVVLIIAAGVCEFEEGSSKNGQTHEHDLLAYTLGVKQLIVGVNKMDSIEPPYSQKRYKEIIKEASTFIKKIGYNPDAVEFVPIPGWNGDN


Parental protein
MLEPSANMPWFKGWKVTRK
MLEPSANMPW.K.W.VT.K
Retrocopy
MLEPSANMPWLKVWEVTSK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide