RetrogeneDB ID:
retro_mputfur_356
Organism:
Location:
GL896905.1:5135519-5135855 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
55.83 %
Coverage:
67.43 %
Frameshifts:
2
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_356
GAGGAGCACGAGGGTGCTGAGAGTCTCTTGAAGATGTGAAATCGGTGAAGAGGCTGTTTC
CTTTCCTGGGACGTGCGGAAGCGGTCCCAAGAGTACGGGAAGACCCTGGATGCCACGGAT
GTCGCCCTGGTTCTGGAGAGGAGTCAGAGCCCCACCGGTCTGGATCTGCACACCCTGGAT
TCTGCGCACACAGGCCCCATCTCTGGGACTTGCTGGAGAACCACAATGAGAAGGCGATCA
AGCTGTGCCGTGCCCTAACTCACCTCCACAGGCCGGCTGGCCCCCCAGGCTGGGCTGGGG
AAGGATCTCGGGGAGAGGCTCACCCTCCAACATGAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EKREGAERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDAMEAALVLEKSLNQALLDLHALGSARTD-PHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLA
E..EGAE.LLKM.N...G..L..DV.K.SQ.E.GKTLDA...ALVLE.S.....LDLH.L.SA.T..PHL.D.LENH......KL........T.L.R.A
Retrocopy
EEHEGAESLLKM*NR*RGCFLSWDVRKRSQ-EYGKTLDATDVALVLERSQSPTGLDLHTLDSAHTG/PHLWDLLENH-NEKAIKLCRAL----THLHRPA


Parental protein
G-PQAGLGEYLFERLTLKHD
G.PQAGLG..L.ERLTL.HD
Retrocopy
G\PQAGLGKDLGERLTLQHD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide