RetrogeneDB ID:
retro_mputfur_358
Organism:
Location:
GL896905.1:10810021-10810451 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
58.11 %
Coverage:
52.33 %
Frameshifts:
2
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_358
AGATCCAGGCAACTTCTGGTGGTCACAGATCTAAGGACTGGATTCTCAGGCATCTCACGT
TAACCTGCCAGGATTCCTACCACCGCTCTGGGTAAGGCAGACTTTCCTCTGCACTATGTG
GACATTGCCATCTGTTGCAACAAGGGAGCTCAATAGCGGGTCTGATGTGGTGAATGCTGG
CATGGGAAGTTCTGTGCATACCTGGTACCATTTCTTGTGAATACCCTTGGGAGGTCGTGC
CTGAGCTCTGCTTCTCCAGAGATCCTCACGACACTGAAAACGAATAGCAGGCTATTGCTG
GAAAGGCTATGACCAACGAGGGATTTCAGGGTAAGCAAATGCTCCAGCTTCTGAGTTCAC
TTCTACTCAGTGTGAAGTTGCAGACTCGTCTGGAGGTGTGCAGGTGCCCTCTGTGTCTGT
TCAGCAGTTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
REPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAH-SVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQ
R...LLVVTD.R..............PT.AL...D.PL.YVDIAI.CN.KGA....GLMW.MLA.EVL...GTIS.E.PWEV.P.L.F.RDP...E.E.Q
Retrocopy
RSRQLLVVTDLRTGFSGISR*P-ARIPTTALGKADFPLHYVDIAICCN-KGAQ/IAGLMW*MLAWEVLCIPGTISCEYPWEVVPELCFSRDPHDTENE*Q


Parental protein
AAAEKAVTKEEFQGEW-TAPAPEFTATQPEVADWSEGVQVPSVPIQQF
A.A.KA.T.E.FQG....APA.EFT.TQ.EVAD.S.GVQVPSV..QQF
Retrocopy
AIAGKAMTNEGFQGKQ/NAPASEFTSTQCEVADSSGGVQVPSVSVQQF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide