RetrogeneDB ID:
retro_mputfur_359
Organism:
Location:
GL896905.1:11169335-11169613 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
63.83 %
Coverage:
84.55 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
PHF5A
Parental gene aliases:
No gene alias available
Parental gene description:
PHD finger protein 5A [Source:HGNC Symbol;Acc:18000]

Genomic region (view in browser)





>retro_mputfur_359
GATTGAATCCCTTGTCACACGCAGGCCACTGTTGCCATCCGAAGATTGTATGAGAAAGGC
GATGTCAAGTGTGTGATCTGTGACCCCTATGGGCGACCCTGCACTCTGATGTGCACACGT
AATGAGTGTAATTATGGCCCTCGCCGGGGGCCTGTCTGATCTGTGGATTCCGTGGAGGAT
CTGATGCCTATGACTGTAAGGAGTGCTCCCACCAGGAGGAAGACAGAGATAGCTGCCCAC
AGATGGTCAGCTTGGGGAGCTCTGAGACAGATCTCTTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
DLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQ-GRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLF
D.I.C..QA.VAI.RL.EK.D.KCVICD.Y.RPCTL.....ECNYG....G.C.ICG..G.SDAY.CKEC..QE.DRD.CP..V.LGSS.TDLF
Retrocopy
D*IPCHTQATVAIRRLYEKGDVKCVICDPYGRPCTLMCTRNECNYGPRR/GACLICGFRGGSDAYDCKECSHQEEDRDSCPQMVSLGSSETDLF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide