RetrogeneDB ID:
retro_mputfur_363
Organism:
Location:
GL896905.1:18347499-18347981 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.87 %
Coverage:
84.97 %
Frameshifts:
3
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_363
CCTAAATTCAACCCCAGGTAGATCAAAGTCAAATACCTGAGGTGCACCGGTAAGGAAGTT
AGTGCTTCCTCTGACCTGGCTGTGAAGATCTATGTACTGGGTCTATCTCCAGAAGAGATT
ATTGATGATACTGCTAAGGCAACAGCAATTGGAAGGGTCTGAGGATGACAGTGAAACTAA
CCATTCAGAACAGACAAGCCCAGATTGAAGTGCAACCTTCTGTCTCTGGCCTGGTTATCA
AAGCCCTCAATGAACCACCAAGAGACAGAAAGAAGCACAAAAACATTAAGTACAGTGGAA
AAACCACTTTTAATGAGATTGTTAATATCAGCCCCAGTCTTTAGTCATTTTTAGCCACAA
AACTCTCTGGAACCATTAAAGAGATCCTAAGGACCACCCAATCTGTGGGACTGTTACCTT
GACTGCATCTACCCTCATGACATCATTGATGACATCAATAGACTGCATTAGACTGCTCAG
CT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNSAVK
PKF.P..IKV.YLRCTG.EV.A.S.LA.KI..LGLSP....DD.AKAT...WKGLR.TVKLTIQNRQAQIEV.PS.S.L.IKAL.EPPRDRKK.KN...K
Retrocopy
PKFNPR*IKVKYLRCTGKEVSASSDLAVKIYVLGLSPEEIIDDTAKATA/NWKGLRMTVKLTIQNRQAQIEVQPSVSGLVIKALNEPPRDRKKHKN--IK


Parental protein
HSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVG-CNVDGRHPHDIIDDINS-GAVECPA
.SG..TF.EIVNI........LA..LSGTIKEIL.T.QSVG.C..D...PHDIIDDIN...A..C.A
Retrocopy
YSGKTTFNEIVNISPSL-*SFLATKLSGTIKEILRTTQSVG\CYLDCIYPHDIIDDINR/TALDCSA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide