RetrogeneDB ID:
retro_mputfur_365
Organism:
Location:
GL896905.1:26222723-26223071 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
62.93 %
Coverage:
79.31 %
Frameshifts:
0
Stop codons:
3


Parental gene:
Parental gene symbol:
Rpl26
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]

Genomic region (view in browser)





>retro_mputfur_365
CGTGTGCAGGAAGATCCTGTCATCCCCACTCTCCAACAAGCTGTGGGGAAAGTACCTCTG
CTCCATGCCCAACCACCTGATGAGGTCCAGGTGGTTTGAAGACACTATAAAGGTCAACAA
ATCAGCAAGGCTGTCCAGGTGTACAGAAAGAAATAGGTCATCTACATCAAGTGTGTACAA
TGTGTGAAAGCTAATGGCACAACTGTCCATGTGGACATTCACCCAAGCAAGGTGGTTATC
ACCAGGCTAAAAATGGACAAAGATCAGAAAAATATTCTTAAACGAAAGGCCAAATTTTGA
CAAGCTGGAAAACAGAAAGGCAAATATAAGGAAGACCTTATTGAGGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KIMSSPLSKELRQKYN-VRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR
.....P....L.Q....V........DEVQVV..HYKGQQI.K.VQVYRKK.VIYI..VQ..KANGTTVHV.IHPSKVVITRLK.DKD.K.IL.RKAK..
Retrocopy
RVQEDPVIPTLQQAVGKVPLLHAQPPDEVQVV*RHYKGQQISKAVQVYRKK*VIYIKCVQCVKANGTTVHVDIHPSKVVITRLKMDKDQKNILKRKAKF*


Parental protein
QVGKEKGKYKEETIEK
Q.GK.KGKYKE..IE.
Retrocopy
QAGKQKGKYKEDLIEE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide