RetrogeneDB ID:
retro_mputfur_368
Organism:
Location:
GL896905.1:4083781-4084177 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
52.55 %
Coverage:
75.43 %
Frameshifts:
4
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_368
AGCTCCCAGATTCCTCAGAATTACTTCATTGAGGTGGAGGCCGCTGTCCCCCGCATGCTC
AGCAGGCCTCAGCAGGCCTCCTGCACCTGCTTCTCTCCAGGTTTCTACCTTAACCTCGAC
GAAGTGCCTCTGGAGGGCCCAGGCCACCACCTCTGCGTGCTGGGGGGTAGGGGGAAGCAC
GAAGGTGCTGAGTCCCTTGAAGATGCGAAATCGGCAAAGAGGCTTTGCGCTTCCCAGGGA
CATTCAGAATTGGTCCCAAGGGAAGTGTGTAAGACCCTGGATGCCACGGAGGTCGCCCCG
GTTCTGGAGAGGAACCAGAGGCCCGCCGGTCTGGATCTGGAACGCCCCAGGTTCTGCGCA
CACAGGCCCCATCTCTGAGACTTGCTGGAGAACCAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SSQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFREL-AEEKREGAERLLKMQN-QRGGRALFQDVQKPSQD-EWGKTLDAME
SSQI.QNY..EVEAAV.R.......AS.T..S.GFY...D.V.LEG.GH....L....K.EGAE.L......QRG..AL..D.Q..SQ..E..KTLDA.E
Retrocopy
SSQIPQNYFIEVEAAVPRMLSRPQQASCTCFSPGFYLNLDEVPLEGPGHHLCVLGGRGKHEGAESLEDAKS\QRG-FALPRDIQNWSQG/EVCKTLDATE


Parental protein
AALVLEKSLNQALLDL-HALGSARTD-PHLCDFLENH
.A.VLE.....A.LDL..A.GSA.T..PHL.D.LENH
Retrocopy
VAPVLERNQRPAGLDL\NAPGSAHTG/PHL*DLLENH


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide