RetrogeneDB ID:
retro_mputfur_37
Organism:
Location:
GL896937.1:3839500-3840154 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
95.43 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_37
ATGGCGACTGTGGAACCGGAAACCACCCCTACTCCTAATCCCCCGCCTACAGAAGAAGAG
AAAACAGAATCTAATCAGGAGGTTGCTAACCCAGAACACTATATTAAACATCCTTTACAG
AACAGATGGGCACTCTGGTTTTTTAAAAATGATAAAAGCAAAACTTGGCAAGCAAACCTT
CGGCTGATCTCTAAGTTTGATACTGTTGAAGACTTTTGGGCTCTGTACAACCACATCCAG
TTGTCTAGTAATTTAATGCCTGGCTGTGACTACTCACTTTTTAAGGATGATATTGAGCCT
ATGTGGGAAGATGAGAAAAACAAACGAGGAGGACGATGGCTAATTACATTGAACAAGCAG
CAGAGACGAAGTGACCTGGATCGCTTTTGGCTAGAGACACTGCTGTGCCTTATTGGAGAA
TCTTTTGATGACTACAGTGATGATGTATGTGGAGCTGTTGTTAATGTTAGAGCTAAAGGT
GATAAGATAGCAATATGGACTACTGAATGTGAAAACAGAGAGGCTGTTACACATATAGGG
AGGGTATACAAGGAAAGGTTAGGACTTCCTCCAAAGATAGTGATTGGTTATCAGTCCCAT
GCAGACACAGCTACTAAGAGCGGCTCCACCACTAAAAATAGGTTTGTTGTTTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
IAIIVMETTPTPNPPPTEEEKTESNQEVANPEHYIKHPLQNRDRWSIWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGI
.A....ETTPTPNPPPTEEEKTESNQEVANPEHYIKHPLQNR..W..WFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKD.I
Retrocopy
MATVEPETTPTPNPPPTEEEKTESNQEVANPEHYIKHPLQNR--WALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDDI


Parental protein
EPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQ
EPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQ
Retrocopy
EPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQ


Parental protein
SHADTATKSGSTTKNRFVV
SHADTATKSGSTTKNRFVV
Retrocopy
SHADTATKSGSTTKNRFVV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide