RetrogeneDB ID:
retro_mputfur_370
Organism:
Location:
GL896905.1:4661177-4661617 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
55.33 %
Coverage:
89.57 %
Frameshifts:
3
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_370
ATGGCCAAGTCTAAGAACTGTACCATAGACAACCAGTCACAAAAATGGCACAGAAACAGC
ATTTTAAAAAACCCTGGTCACAAAGATCAGAATCTCTTAAGAGGATAGACACTGAGTTCC
TGAGGAGCATGTGCTTTGCCAGGAAGCATAACAAGAAGAGCCTGAAGAAGGTGCAGGACA
ACTCCACCAAAGCCGTGAGAGGATGTGCTGAGGCTGTGAAGGCCCTAGTGAAGCCCAAAG
AGATCAGACCCAGCATACTAAATGGCTGTAGGTATAAGCTCAGTCAACTTGCCTACATTG
CTCACCCCAAGCTTAGGAAATGTGTGGGTGCTGTGTTGCCAAGGGTCTCAAACTTTGGCC
TCAACCAGCCAAAGGCCAAGACTCTAACCAAGGCCCAGGCTATGCCTGTGGCTCGGGTTC
CCAAATGTGCTCCCGATCCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAKSKNHTTHNQSRKWHRNGI-KKPRSQRYESLKG-VDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAEAIKALVKPKEVKPKIPKGGSRKLNRLAY
MAKSKN.T..NQS.KWHRN.I.K.P.......L.G..D..FLR.M.FA.KHNKK.LKK.Q.N..KA....AEA.KALVKPKE..P.I..G...KL..LAY
Retrocopy
MAKSKNCTIDNQSQKWHRNSILKNPGHKDQNLLRG/IDTEFLRSMCFARKHNKKSLKKVQDNSTKAVRGCAEAVKALVKPKEIRPSILNGCRYKLSQLAY


Parental protein
IAHPKLGKRARA-RIAKGLRLCRP-KSKAKAQTKAQASAATPAPAPAPAP
IAHPKL.K...A...AKGL.L......KAK..TKAQA......P..AP.P
Retrocopy
IAHPKLRKCVGA/CVAKGLKLWPQ\QPKAKTLTKAQAMPVARVPKCAPDP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide