RetrogeneDB ID:
retro_mputfur_371
Organism:
Location:
GL896905.1:7809840-7810052 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
51.39 %
Coverage:
52.63 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
HMGN1
Parental gene aliases:
No gene alias available
Parental gene description:
high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:4984]

Genomic region (view in browser)





>retro_mputfur_371
GCTCCTGTAAAGGTGGAAACGAAACCAAACAAGGCGACAGGAAAGGATAAATCTTCAGAC
AAAAAAGTACTAACCAGAGGGGAGTGAAGGGAAACCAGGCTGAAGTAGCTAACCAGAAAA
CAAAATAAGACTCACCTGCAGAAATCAGAGAAAATGAAAATGAGGAGAGTCTAGCTTCTG
ATGAAGCAGGAGAGAAAGAAACCAAGTCTGAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AKVEAKPKKAAAKDKSSDK-KVQTKGKRGAKGKQAEVANQEAKDDLPAENGETKN-ESPASDEAGEKEAKSD
A.V....K...A..K............RG.KG.QAEVANQ..K.D.PAE..E..N.ES.ASDEAGEKE.KSD
Retrocopy
APVKVETKPNKATGKDKSS/RQKSTNQRGVKGNQAEVANQKTK*DSPAEIRENENEESLASDEAGEKETKSD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide