RetrogeneDB ID:
retro_mputfur_380
Organism:
Location:
GL896906.1:3263944-3264943 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
94.59 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_380
ATGGTGAAGGTCGGAGTGAATGGATTTGGCTATACTGGGTACCTGGTCACCAGGGCTGCT
TTTAACTCTGGTAAAGTGGATATTGTCACCATCAATGACCCTTTCATTGATCTCAACTAC
ATGGTCTACATGTTCCAGTATGATTCTACCCATGGTAAATTCCACGGCACAGTCAAGGCT
GAGAACGGGAAGCTTGTCATCAATGGGAAGTCCATCTCCATCTTCCAGGAACGAGATCCC
ACCAACATCAAATGGGGCGATGCTGGTGCTGAGTATGTTGTGGAGTCCAGTGGGGTCTTC
ACCACCATGGAGAAGGCTGGGGCTCACTTGAAGGGCGGGGCCAAGAGGACCATCATCTCC
ACTTCTTCTGCTGACGCCCCCATGTTCATGATGGGTGTGAACCATGAGAAGTATGACAAC
TCCCTCAAGATTGTCAGCAATGCCTCCTGTACCACCAACTGCTTGGCTCCTCTGGCCAAG
GTCATCCATGACAACTTCGGCATTGTGGAAGGACTCATGACCACCGTCCATGCCATCACT
GCCACCCAGAAGACTATGGATGGCCCCTCTGGGAAGCTGTGGCGTGACGGCTGAGGGGCT
GCCCAGAACATCATCCCTGCTTCCACTGGTGCGGCCAAGGCTGTAGGCAAGGTCATCCCT
GAGCTGAATGGGAAGCTCACTGGCATGGCCTTCTGTGTCCCCACCCCCAATGTGTCTGTC
GTGGATCTGACCTACCGCCTGGAGAAAGCTGCCAAATATGATGACGTCAAGAAGGAGGTG
AAGCAGGCATCAGAGGGCCCCCTCAAGGGCATCCTGGGGTACACTGAGGACCAGGTTGTC
TCCTGTGACTTCAACAGTGACACCCACTCCTCTACCTTCGATGCTGGAGCTGGCATTGCT
CTCAATGACCACTTTGTCAAGCTCATTTCCTGGTATGACAATGAATTTGGTTACAGCAAT
CGGGTGGTGGACCACATGGTCCACATGGCCTCTAAGGAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAENGKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVF
MVKVGVNGFG..G.LVTRAAFNSGKVDIV.INDPFIDLNYMVYMFQYDSTHGKF.GTVKAENGKLVINGKSISIFQERDP.NIKWGDAGAEYVVES.GVF
Retrocopy
MVKVGVNGFGYTGYLVTRAAFNSGKVDIVTINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGKSISIFQERDPTNIKWGDAGAEYVVESSGVF


Parental protein
TTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGA
TTMEKAGAHLKGGAKR.IIS..SADAPMF.MGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKT.DGPSGKLWRDG.GA
Retrocopy
TTMEKAGAHLKGGAKRTIISTSSADAPMFMMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTMDGPSGKLWRDG*GA


Parental protein
AQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIA
AQNIIPASTGAAKAVGKVIPELNGKLTGMAF.VPTPNVSVVDLT.RLEKAAKYDD.KK.VKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIA
Retrocopy
AQNIIPASTGAAKAVGKVIPELNGKLTGMAFCVPTPNVSVVDLTYRLEKAAKYDDVKKEVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIA


Parental protein
LNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE
LNDHFVKLISWYDNEFGYSNRVVD.MVHMASKE
Retrocopy
LNDHFVKLISWYDNEFGYSNRVVDHMVHMASKE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide