RetrogeneDB ID:
retro_mputfur_384
Organism:
Location:
GL896906.1:6181503-6181945 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
85.14 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
4


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_384
ATGGCAGCCACAATGGTCTCAGGAGTAAAAGTACCTTGCAATTTTTGACTGTTGGAAGAA
CTGGAAGAAGGCCAGAAAGAAGTAGGAGTTGGCACAGTTAGCTGGGGTCTAGAAGCTGAC
AAAGACATGACACTTACAAGATGAACAGGGATGATAATTGGGCCTCCAAGAACAATTTAT
GAAAACTGAATTTACAGCCTTAAAATAGAATGTGGACCTAAATACCCAGAAGCACCCCAC
CTTTGTAAGATTTGTAACAAAAATTACTATGAATGGAGTTAATAGTTCTAATGGAGTGAT
AGACCCAAGAGCCATATCAGTGCTAGCAAAATGGCAGAATTCATATAGCATCAAAGTTGT
CCTGCAAGAGTTCCAGCACCTAATGATGTCTAAAGGAAACATGAAACTCTGTCAGCTGCC
TGAATGACAGTGTTATGGCAAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAATTGSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAP-PFVRFVTKINMNGVNSSNGV
MAAT..SGVKVP.NF.LLEELEEGQK.VG.GTVSWGLE.D.DMTLTR.TGMIIGPPRTIYEN.IYSLKIECGPKYPEAP..FVRFVTKI.MNGVNSSNGV
Retrocopy
MAATMVSGVKVPCNF*LLEELEEGQKEVGVGTVSWGLEADKDMTLTR*TGMIIGPPRTIYEN*IYSLKIECGPKYPEAP\TFVRFVTKITMNGVNSSNGV


Parental protein
VDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
.DPRAISVLAKWQNSYSIKVVLQE...LMMSK.NMKL.Q.PE.QCY.N
Retrocopy
IDPRAISVLAKWQNSYSIKVVLQEFQHLMMSKGNMKLCQLPE*QCYGN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide