RetrogeneDB ID:
retro_mputfur_386
Organism:
Location:
GL896906.1:15808370-15808883 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
84.8 %
Coverage:
96.07 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
CETN2
Parental gene aliases:
No gene alias available
Parental gene description:
centrin, EF-hand protein, 2 [Source:HGNC Symbol;Acc:1867]

Genomic region (view in browser)





>retro_mputfur_386
GCTTCCAGCTACAAGAAGTCAAACGTGGCCTCTACCAGCCAGAAAAGAAAGGTGGGTCCT
AAGCCTGAACTCACGGAAGATCAGAAGCAAGAAGTTCGCGAAGCATTTGACCTCTTCGAT
GCCGACGGAAGTGGGACCATCGACGTGAAGGAGCTGAAGGTGGCCATGAGAGCGCTGGGC
TTTGAACCCAGGAAGGAAGAGATGAAGAAGATGATCTCCGAAGTAGACAAAGAAGGCACA
GGGAAAATCAGCTTCAATGACTTTTTGGCCGTGATGACTCAGAAGATGGCCGAGAAAGAC
ACCAAAGAAGAAATCCTGAAGGCTTTCAGGCTCTTTGATGATGATGAAACTGGGAAGATC
TCCTTCAAAAACCTAAAGCGCGTGGCCAACGAGTTAGGGGAAAACCTCACCGACGAGGAG
CTGCAGGAAATGATAGACGAAGCCGATCGGGATGGAGATGGCGAAGTGAACGAGGAAGAA
TTTCTTCGGATCATGAAAAAGACCAGCTTGTAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ASNFKKASMASSAQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMSEKD
AS..KK...AS..Q.....PKPELTE.QKQE.REAFDLFDADG.GTIDVKELKVAMRALGFEP.KEE.KKMISE.DKEGTGK..F.DFL.VMTQKM.EKD
Retrocopy
ASSYKKSNVASTSQKRKVGPKPELTEDQKQEVREAFDLFDADGSGTIDVKELKVAMRALGFEPRKEEMKKMISEVDKEGTGKISFNDFLAVMTQKMAEKD


Parental protein
TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTSLY
TKEEILKAF.LFDDDETGKISFKNLKRVA.ELGENLTDEELQEMIDEADRDGDGEVNE.EFLRIMKKTSLY
Retrocopy
TKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTSLY


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide