RetrogeneDB ID:
retro_mputfur_39
Organism:
Location:
GL896945.1:12771073-12771859 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.48 %
Coverage:
98.82 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
CENPV
Parental gene aliases:
No gene alias available
Parental gene description:
centromere protein V [Source:HGNC Symbol;Acc:29920]

Genomic region (view in browser)





>retro_mputfur_39
ATGGGCAGAGTGAGGAACGGCGCCAGCACCCAGTCGCGGGGGCGAAAGCGTCCCGGGGAT
CCCGCCACCGCCTGTGCAGCCATCCCGGCCATGGGCGCCCGGCGCCCCCCTTTCCAAGTC
CGCGTGGGGAGCCACGCGGCGGGAAGGAAGTCGGCGGCGGCCAGGCGGGATCCCGCAAGG
TTGCGGCGGAAGCGCTGGTGGCGGCGGACCCGGGAGGCAGGCTCCAAAGGCCCGCTGCGA
TCCCCGAAGCCCCCGGCGCCCGCCGTGTCCTCTGGCGAGATGGACCTGGGCGCGCAGCGG
GAGCGCTGGGAGACGTTCAGGAAGCGGCGGGGCCTCAGCTGCGAGGGCGCCGCCAAGTTC
CTGCTGGACACCTTCGAGTACCCAGGCCTGGTGTATCACACCGGAGGCTGCCACTGCGGC
GCGGTCCGCTTCGCCGTCTGGGCCCCCGCAGACCTGCGCGTGGTGGATTGCAGCTGCAGG
CTGTGCAGGAAGAAGCAGCACCGACACTTCCTCGTCCCGGCCTCGCGCTTCACTCTCCTG
CTGGGCGCCGAGAGCATCGTCACCTATCGATCCCACGCGCACCCGGCGCTGCACAGCTTC
TGCAGCAGGTGCGGGGTGCAGAGTTTCCACGCCTCTGTCTCTGACCCCGGCGTGTATGGC
GTCGCCCCGCACTGCCTGGACGCCGGCACCGTGCGCAGTGTGGTCATCGAGGAGGTCGAC
GGTGGCGACTGGGGGGAGGAGGCCGTGAAGGAGCCCAAGGCCATCCAGAGCGCGTCCCCC
GAGTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LDSADQXERWETFQKRQRLTFEGAAKLLLDTFEYQGLVKHTGGCHCGAIRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAENITTYTFNT
.D...Q.ERWETF.KR..L..EGAAK.LLDTFEY.GLV.HTGGCHCGA.RF.VWA.ADL...DC.C..C.KKQ.RHF.VPASRF.LL.GAE.I.TY....
Retrocopy
MDLGAQRERWETFRKRRGLSCEGAAKFLLDTFEYPGLVYHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLLGAESIVTYRSHA


Parental protein
HKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSVVIEEFNGTDW-EKAMKEHKTIKNMSKE
H.A.H.FC.RCGVQSF....S.PG..G.APHCLD.GTVRSVVIEE..G.DW.E.A.KE.K.I...S.E
Retrocopy
HPALHSFCSRCGVQSFHASVSDPGVYGVAPHCLDAGTVRSVVIEEVDGGDWGEEAVKEPKAIQSASPE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide