RetrogeneDB ID:
retro_mputfur_397
Organism:
Location:
GL896907.1:5816782-5817370 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
83.33 %
Coverage:
59.21 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_397
GTGGTGGCGTCTGGGAGAGCTATGGCTCAGAAAACCTGGGAACTGGCCAACAACTTGCTG
GAAGCCCAGAGCATCGATGAAATCTACAAATACGACAAGAAACAGCAGCAAGAAATAATA
GGCAGCGAAGCCCTGGGCTAAGGATCACCATTACTTTAAGTACTGTAAAATCTCAGCATT
GGCTCTACTGAAAATGGTGATGCATGGCAGATCGGGAGGCAACTTAGAAGTGTTGGGCTT
AATGCTGGGAAGGGTGAATGGTGAAACCATGATCATTATGGACAGTTTGGCTTGCTTGTA
GAGGGCACTGAAACCCGAGTAAATGCTCAGGCTGCTGCATATGAGTATGTGGCTGTGTAT
ATAGAAAACACCAAACAGGTCGGCTGCCTTGAAAATGCAATTGGCGGGTATCGCAGCCAT
CCTGGCTATGGCTGCTGGCTTTCTGGGATTGATATTACTGCTCAGATGCTCAGTCAGCAG
TTCCGGGAACCATTCGTAGCAGTAATAATTGACCCAACAAGAACAGTATCAGCAGGGAAA
GTGAATCTTGGAGCCTTTAGGACATACCCAAAGGGCTACAAACCCTCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEIL-AAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDS-FAL
..ASG..MAQKTWELANN..EAQSIDEIYKYDKKQQQEI..AAKPW.KDHHYFKYCKISALALLKMVMH.RSGGNLEV.GLMLG.V.GETMIIMDS.F.L
Retrocopy
VVASGRAMAQKTWELANNLLEAQSIDEIYKYDKKQQQEII\AAKPWAKDHHYFKYCKISALALLKMVMHGRSGGNLEVLGLMLGRVNGETMIIMDS/FGL


Parental protein
PVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKSFFPA
.VEGTETRVNAQAAAYEY.A.YIEN.KQVG.LENAIG.Y.SHPGYGCWLSGID...QML.QQF.EPFVAV.IDPTRT.SAGKVNLGAFRTYPK...P.
Retrocopy
LVEGTETRVNAQAAAYEYVAVYIENTKQVGCLENAIGGYRSHPGYGCWLSGIDITAQMLSQQFREPFVAVIIDPTRTVSAGKVNLGAFRTYPKGYKPS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide