RetrogeneDB ID:
retro_mputfur_399
Organism:
Location:
GL896907.1:15521327-15521584 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
87.36 %
Coverage:
56.58 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
RPS18
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S18 [Source:HGNC Symbol;Acc:10401]

Genomic region (view in browser)





>retro_mputfur_399
TCTCTAGTGATCCCTGAGAAGTTCAGCACATTTTGCGAGTACTCAACACTAGTATCGATG
GGTGGTGGGAAATAGCCTCTGCCATCACTGCAATTAAGGGTGTGGGGCAAAGATAAGCTC
ATGTAGTGTTAAGGAAAGCAGACCTCAATCTCACTAAGAGGGCCGGCGAGCTCACTGAGG
ATGAGGTGGAACGTGTGATCACCATTATGCAGAATCCTCGCCAGTATAAGATCCCAGACT
GGTTTTTGAACAGAAGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SLVIPEKF-QHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQ
SLVIPEKF.QHILRVLNT.IDG...IA.AITAIKGVG.R.AHVVLRKAD..LTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNR.
Retrocopy
SLVIPEKF/QHILRVLNTSIDGWWEIASAITAIKGVGQR*AHVVLRKADLNLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide