RetrogeneDB ID:
retro_mputfur_40
Organism:
Location:
GL897335.1:184330-184885 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
90.76 %
Coverage:
99.46 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_40
ATCATTTGCTATCCGCTTGACCCGGAAAACCCTACGAAATCATGCAAGTCAAGAGGTTCA
AATCTCCGTGTTCACTTTAAGAACACACATGAAACTGCTCAGGCCATCAAGGGTATGCAT
ATCCGAAAAGTCACCAAGTATCTGAAAGACGTCACTTTGCAGAAGCAGTGTGTGCCATTC
CGTCACTACAGTGGTGGAGTTGGTAGGTGTGCCCAGGCCAAACAGTGGGGCGGGACACGA
GGTCGGTGGCCCAAGAAGAGTGCTGAATTTTTACTGCACATGCTTACAAATGCAGAGAGT
AATGTTGAACTTAAGGGTTTAGATGTCGATTCCCTGGTCATTGAGCACATTCAGGTGAAC
AAAGCCCCCAAGATGTGGCGTAGGACTTACAGGGCTCATGGTCGCATTAACCCATACATG
AGCTCTCCCTGCCACACTGAGATGATCCTTACTGAAAAAGAGCAGATTGTTCCTAAACCA
GAAGAGGAGGTTGCACAGAAGAAAAAGATATCCCAGAGGAAACTGAAGAAACAAAAACTT
ACGGCCCAAGAGTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAES
...Y.LDPENPTKSCKSRGSNLRVHFKNT.ETAQAIKGMHIRK.TKYLKDVTLQKQCVPFR.Y.GGVGRCAQAKQWG.T.GRWPKKSAEFLLHML.NAES
Retrocopy
IICYPLDPENPTKSCKSRGSNLRVHFKNTHETAQAIKGMHIRKVTKYLKDVTLQKQCVPFRHYSGGVGRCAQAKQWGGTRGRWPKKSAEFLLHMLTNAES


Parental protein
NAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE
N.ELKGLDVDSLVIEHIQVNKAPKM.RRTYRAHGRINPYMSSPCH.EMILTEKEQIVPKPEEEVAQKKKISQ.KLKKQKL.A.E
Retrocopy
NVELKGLDVDSLVIEHIQVNKAPKMWRRTYRAHGRINPYMSSPCHTEMILTEKEQIVPKPEEEVAQKKKISQRKLKKQKLTAQE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide