RetrogeneDB ID:
retro_mputfur_400
Organism:
Location:
GL896907.1:16558881-16559159 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
78.72 %
Coverage:
75.0 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
TMEM254
Parental gene aliases:
No gene alias available
Parental gene description:
transmembrane protein 254 [Source:HGNC Symbol;Acc:25804]

Genomic region (view in browser)





>retro_mputfur_400
GTTGTCTCCTGGCCTCAAAGTATCCCTTGTCAGAGCCGTGGGTCCCTGTGTCTGTTCACT
TAGGACTTGGTGGACCATCATCACAGCCTCCTACACAGTGGCCACTGGCTTGCCTGGATG
ATCGATGTGGGAGAGTCCTTGTTAGCCATGGTTTTGTGTAAGTCTAAAAGCAACATGGAT
GGACGGCTCAGCTGCTCTGGTTCCTACAGACTTTCCTCTTTGGGATAGCATCTCTCTCCA
TCTTGATTGCTTATAGACCCAAAGGCCAAAAACACACT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VVFWPQSIPYQSLGPLGLFTQYLVDHHHTFLHNGYWLAWLIHVGESLYAMVLCKSKGITDGR-AQLLWFLQTFLFGIASLSILIAYRPKRQKQT
VV.WPQSIP.QS.G.L.LFT..LVDHHH..LH.G.WLAW.I.VGESL.AMVLCKSK...DGR.AQLLWFLQTFLFGIASLSILIAYRPK.QK.T
Retrocopy
VVSWPQSIPCQSRGSLCLFT*DLVDHHHSLLHSGHWLAWMIDVGESLLAMVLCKSKSNMDGR/AQLLWFLQTFLFGIASLSILIAYRPKGQKHT


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide