RetrogeneDB ID:
retro_mputfur_406
Organism:
Location:
GL896907.1:12095841-12096096 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
62.35 %
Coverage:
52.23 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL24
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L24 [Source:HGNC Symbol;Acc:10325]

Genomic region (view in browser)





>retro_mputfur_406
AATCCTTGGCAGATAAACCGGACAGTCCACTATAGAAGAAAGCACAACAAGGGACAGTTG
GAAGAAATTCAAAAGAAAAGAACCCGCCATGCAATCAAATTCCAAAGGGCCATCCCTGGT
GCATTTCTTGCTGGTACAAAGGCCCAGAGGAATCAGAAGCCTGAAGTTAGGAAGGCTCAA
GGAGCAAAGAGGCCATCAGGGCTGCCAAGGAAGCAAGTTTCTAAAACAACAGCAATGGCT
CCCACGAAGACAGCG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
NPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEVRKAQ---REQAIRAAKEAKKAKQASKKTA
NP.QIN.TV.YRRKH.KGQ.EEIQKKRTR.A.KFQRAI.GA.LA...A.RNQKPEVRKAQ...R..........K....A..KTA
Retrocopy
NPWQINRTVHYRRKHNKGQLEEIQKKRTRHAIKFQRAIPGAFLAGTKAQRNQKPEVRKAQGAKRPSGLPRKQVSKTTAMAPTKTA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide