RetrogeneDB ID:
retro_mputfur_41
Organism:
Location:
GL896981.1:5294934-5295276 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
78.76 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
EIF1
Parental gene aliases:
No gene alias available
Parental gene description:
eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249]

Genomic region (view in browser)





>retro_mputfur_41
ATGTCTGCTATCCAGAGCCTCCACTCTTTCGACCCCTTTGCTGATGCAAATAAAGGTGAT
TATCTGCTTCCTCCTGGCACGGGGGCTTATTTCCATATAAGAATTCGACAGAGAAATGGC
AGGAAGACCCTTACTACTATCCAAGAGATGGCTGGTGATTATGATAAAAAGAAACCAATG
AAGGTGTATAAGAAGAAATTTGCCTGCAATGGTACTATAGTAGAGCATCCAGAATATGGA
GAAGTAATTCAGATACAGGGTGAGCAGCACAAGAACATAACCCAGTTCCTGGTAGAGACT
GGACTGGCTAAGGATGACAAGCTGAAGGTTCATGGGTTTTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEI
MSAIQ.LHSFDPFADA.KGD.LLP.GT..Y.HIRI.QRNGRKTLTT.Q..A.DYDKKK..K..KKKFACNGT..EHPEYGEVIQ.QG.Q.KNI.QFLVE.
Retrocopy
MSAIQSLHSFDPFADANKGDYLLPPGTGAYFHIRIRQRNGRKTLTTIQEMAGDYDKKKPMKVYKKKFACNGTIVEHPEYGEVIQIQGEQHKNITQFLVET


Parental protein
GLAKDDQLKVHGF
GLAKDD.LKVHGF
Retrocopy
GLAKDDKLKVHGF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide