RetrogeneDB ID:
retro_mputfur_417
Organism:
Location:
GL896908.1:20240336-20240633 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
87.88 %
Coverage:
62.26 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
PIN4
Parental gene aliases:
No gene alias available
Parental gene description:
protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Source:HGNC Symbol;Acc:8992]

Genomic region (view in browser)





>retro_mputfur_417
AGGGCTCTGCCGCAAGCTCCGAAGATGCCGCCCAAGGGAAAAAGTGGTTCTGGGAAAGGG
GGGGAAGGGGCAGCAGCCTCTGGGAGTGACAGTTCTGACAAGAAAGCTCAGGGTCCCAAA
GGTAGTGGCAGTGCGGTAAAGGTCAGACACATTCTGTGTGAAAAACATGGGAAAATCATG
GAAGCCATGGAAAAGTTAAAGGCTGGGAGGAGATTCAATGAAGTGGCCACACAGTATAGT
GAAGCTAAAGCCAGGCAAGGGGGCGACTTGGGTCGGAGGACCGGAGGTTCCATGGTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RVLPQVPKMPPKGKSGSGKGGKGGAASGSDSSDKKAQGPKGGGSAIKVRHILCEKHGKIMEAMEKLKSGMRFNEVATQYSEDKARQGGDLGWMTRGSMV
R.LPQ.PKMPPKGKSGSGKGG.G.AASGSDSSDKKAQGPKG.GSA.KVRHILCEKHGKIMEAMEKLK.G.RFNEVATQYSE.KARQGGDLG..T.GSMV
Retrocopy
RALPQAPKMPPKGKSGSGKGGEGAAASGSDSSDKKAQGPKGSGSAVKVRHILCEKHGKIMEAMEKLKAGRRFNEVATQYSEAKARQGGDLGRRTGGSMV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide