RetrogeneDB ID:
retro_mputfur_418
Organism:
Location:
GL896908.1:22063807-22064144 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
60.66 %
Coverage:
98.31 %
Frameshifts:
5
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_418
GCTTTTAAAGATACCAGAAAGACACCAGAGGTGGTGACTCACAGAATCAGAATTACTCTA
ACCAGCCATGACAGAAAATCTTGGAGAAAGTATAGGCTGACTTATCCTCAGGAGCAAAAA
GGAAAGGAATCTCCAAAGAGAAAAGACCAGTTTGGATGCCCACCAAGACTCTGAGAATCA
CACAAGAAAAACTCCCCGTGGCAGGGTCCTAAAACTGGGGTTTGTTTTCATGTCAGGACC
AACAAGTGAATCATTGATTGCCCCATGCTTCTAAGACTCTTAAGCAAATGCCTCCCTCCA
TATTGAGTTAGGAGTTGAGGTTGAAGTTACTTTTGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AFKDTGKTPVEPEVAIHRIRITLTSRNVKS-LEKVCADLIRGAKEKNL-KVKGPVRMPTKTLRIT-TRKTPCG-EGSKTWDRFQMRIHKRLID-LHSPSE
AFKDT.KT...PEV..HRIRITLTS...KS.LEKV.ADL..GAK.K...K.K.PV.MPTKTLRIT.TRKTP.G..G.KT...F..R..K..ID.L...S.
Retrocopy
AFKDTRKT---PEVVTHRIRITLTSHDRKS/LEKV*ADLSSGAKRKGISKEKRPVWMPTKTLRIT/TRKTPRG/QGPKTGVCFHVRTNK*IID/LPHASK


Parental protein
IVKQI-TSISIEPGVEVEVTIA
..KQ...S..IE.GVEVEVT.A
Retrocopy
TLKQM/ASLHIELGVEVEVTFA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide