RetrogeneDB ID:
retro_mputfur_42
Organism:
Location:
GL897010.1:1012050-1012521 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
94.87 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_42
ATGGTGCCGAAAGCTAAGAAGGAAGCCCCTGCCCCTCCCAAAGCCGAAGCCAAAGCAAAA
GCTTTGAAAGCCAAGAAAGCGGTGCTGAAAGGCGTCCACAGTCACAGAAAAAAGAAGATC
CGCACATCACCTACGCTCCGACGACCCAAGACTCTGCGTCTCCGAAGGCAACCCAAATAC
CCTCGAAAGAGCGCCCCCAGGAGAAACAAGCTTGACCACCATGACATCATCAAGTTCCCC
CTGACTACTGAGTCGGCCATGAAGAAAATAGAAGACAACAACACGCTTGTGTTCATTGTG
GATGTCAAGGCCGACAAGCACCAGATCAAACAGGCTGTGAAGAAGCTCTATGACATGGAT
GTAGCCAAGGTCAACACCTTAATCAGGCCTGATGGAGAGAAGAAGGCATACGTTCGGCTG
GCCCCTGACTATGATGCTTTGCATGTTGCCAACAAAATTGGGATCATCTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIV
M.PKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSH.KKKIRTSPT.RRPKTLRLRRQPKYPRKSAPRRNKLDH..IIKFPLTTESAMKKIEDNNTLVFIV
Retrocopy
MVPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHRKKKIRTSPTLRRPKTLRLRRQPKYPRKSAPRRNKLDHHDIIKFPLTTESAMKKIEDNNTLVFIV


Parental protein
DVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII
DVKA.KHQIKQAVKKLYD.DVAKVNTLIRPDGEKKAYVRLAPDYDAL.VANKIGII
Retrocopy
DVKADKHQIKQAVKKLYDMDVAKVNTLIRPDGEKKAYVRLAPDYDALHVANKIGII


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide